CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022853
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Chemokine-like factor 
Protein Synonyms/Alias
 C32 
Gene Name
 CKLF 
Gene Synonyms/Alias
 CKLF1; HSPC224; UNQ410/PRO772 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
7*MDNVQPKIKHRPFCubiquitination[1, 2]
9DNVQPKIKHRPFCFSubiquitination[2]
131DGALIYRKLLFNPSGubiquitination[2, 3, 4]
142NPSGPYQKKPVHEKKubiquitination[2]
143PSGPYQKKPVHEKKEubiquitination[2]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 May play an important role in inflammation and regeneration of skeletal muscle. Partly inhibited by interleukin 10. 
Sequence Annotation
 DOMAIN 13 133 MARVEL.  
Keyword
 Alternative splicing; Chemotaxis; Complete proteome; Cytokine; Membrane; Reference proteome; Secreted; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 152 AA 
Protein Sequence
MDNVQPKIKH RPFCFSVKGH VKMLRLALTV TSMTFFIIAQ APEPYIVITG FEVTVILFFI 60
LLYVLRLDRL MKWLFWPLLD IINSLVTTVF MLIVSVLALI PETTTLTVGG GVFALVTAVC 120
CLADGALIYR KLLFNPSGPY QKKPVHEKKE VL 152 
Gene Ontology
 GO:0005576; C:extracellular region; IDA:UniProtKB.
 GO:0005615; C:extracellular space; IEA:UniProtKB-KW.
 GO:0016021; C:integral to membrane; IDA:UniProtKB.
 GO:0008009; F:chemokine activity; IDA:UniProtKB.
 GO:0008283; P:cell proliferation; IDA:UniProtKB.
 GO:0048247; P:lymphocyte chemotaxis; IDA:UniProtKB.
 GO:0048246; P:macrophage chemotaxis; IDA:UniProtKB.
 GO:0030593; P:neutrophil chemotaxis; IDA:UniProtKB.
 GO:0032940; P:secretion by cell; IDA:UniProtKB. 
Interpro
 IPR008253; Marvel. 
Pfam
  
SMART
  
PROSITE
 PS51225; MARVEL 
PRINTS