CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011153
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 26S proteasome regulatory subunit RPN9 
Protein Synonyms/Alias
 Proteasome non-ATPase subunit 7 
Gene Name
 RPN9 
Gene Synonyms/Alias
 NAS7; YDR427W; D9461.14 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
53TKFFDDAKSTPLRLRubiquitination[1]
72FVSKFYDKINQLSVVacetylation[2]
379EWNDQVEKLGKKMEAubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. 
Sequence Annotation
 DOMAIN 282 352 PCI.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Proteasome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 393 AA 
Protein Sequence
MFNNHEIDTI LSTLRMEADP SLHPLFEQFE KFYEEKLWFQ LSESLTKFFD DAKSTPLRLR 60
LYDNFVSKFY DKINQLSVVK YLLASLKDSK DFDESLKYLD DLKAQFQELD SKKQRNNGSK 120
DHGDGILLID SEIARTYLLK NDLVKARDLL DDLEKTLDKK DSIPLRITNS FYSTNSQYFK 180
FKNDFNSFYY TSLLYLSTLE PSTSITLAER QQLAYDLSIS ALLGDKIYNF GELLHHPIME 240
TIVNDSNYDW LFQLLNALTV GDFDKFDSLI KVQISKIPIL AQHESFLRQK ICLMTLIETV 300
FVKNIRMLSF EDISKATHLP KDNVEHLVMR AISLGLLKGS IDQVNELVTI SWVQPRIISG 360
DQITKMKDRL VEWNDQVEKL GKKMEARGQS IWV 393 
Gene Ontology
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0008541; C:proteasome regulatory particle, lid subcomplex; IDA:SGD.
 GO:0034515; C:proteasome storage granule; IDA:SGD.
 GO:0005198; F:structural molecule activity; IMP:SGD.
 GO:0043248; P:proteasome assembly; IMP:SGD.
 GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD. 
Interpro
 IPR000717; PCI_dom.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF01399; PCI 
SMART
 SM00088; PINT 
PROSITE
  
PRINTS