CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-045176
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Thioredoxin-like protein 4A 
Protein Synonyms/Alias
  
Gene Name
 TXNL4A 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
63RGLVVSPKDYSTKYRubiquitination[1]
68SPKDYSTKYRY****ubiquitination[1, 2, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 71 AA 
Protein Sequence
MYELYDPCTV MFFFRNKHIM IDLGTGNNNK INWAMEDKQE MVDIIETVYR GARKGRGLVV 60
SPKDYSTKYR Y 71 
Gene Ontology
 GO:0005681; C:spliceosomal complex; IEA:InterPro.
 GO:0007067; P:mitosis; IEA:InterPro. 
Interpro
 IPR004123; mRNA_splic_U5.
 IPR012336; Thioredoxin-like_fold. 
Pfam
 PF02966; DIM1 
SMART
  
PROSITE
  
PRINTS