CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-045022
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Cysteine protease ATG4D 
Protein Synonyms/Alias
  
Gene Name
 ATG4D 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
91PRKMAFAKMDPSCTVubiquitination[1]
167TGRLLRAKRPSSEDFubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Autophagy; Complete proteome; Cytoplasm; Hydrolase; Protease; Protein transport; Reference proteome; Thiol protease; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 177 AA 
Protein Sequence
VKELLRCELC LGIMGGKPRH SLYFIGYQGR PTPSSLLPPP TAPPLTPAPP ADDFLLYLDP 60
HYCQPTVDVS QADFPLESFH CTSPRKMAFA KMDPSCTVGF YAGDRKEFET LCSELTRVLS 120
SSSATERYPM FTLAEGHAQD HSLDDLCSQL AQPTLRLPRT GRLLRAKRPS SEDFVFL 177 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
 GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.
 GO:0006914; P:autophagy; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0006508; P:proteolysis; IEA:UniProtKB-KW. 
Interpro
 IPR005078; Peptidase_C54. 
Pfam
 PF03416; Peptidase_C54 
SMART
  
PROSITE
  
PRINTS