CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023618
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Endoplasmic reticulum-Golgi intermediate compartment protein 3 
Protein Synonyms/Alias
 Serologically defined breast cancer antigen NY-BR-84 
Gene Name
 ERGIC3 
Gene Synonyms/Alias
 C20orf47; ERV46; SDBCAG84; CGI-54; PRO0989 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
8MEALGKLKQFDAYPKubiquitination[1, 2]
15KQFDAYPKTLEDFRVubiquitination[1, 2]
174RRRGWAFKNPDTIEQubiquitination[2]
190RREGFSQKMQEQKNEubiquitination[2]
337MMVKLTEKHRSFTHFubiquitination[2]
381QKKIDLGKTT*****ubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Possible role in transport between endoplasmic reticulum and Golgi (By similarity). 
Sequence Annotation
 CARBOHYD 241 241 N-linked (GlcNAc...).
 CARBOHYD 266 266 N-linked (GlcNAc...) (Potential).  
Keyword
 Alternative splicing; Complete proteome; Endoplasmic reticulum; ER-Golgi transport; Glycoprotein; Golgi apparatus; Membrane; Polymorphism; Reference proteome; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 383 AA 
Protein Sequence
MEALGKLKQF DAYPKTLEDF RVKTCGGATV TIVSGLLMLL LFLSELQYYL TTEVHPELYV 60
DKSRGDKLKI NIDVLFPHMP CAYLSIDAMD VAGEQQLDVE HNLFKQRLDK DGIPVSSEAE 120
RHELGKVEVT VFDPDSLDPD RCESCYGAEA EDIKCCNTCE DVREAYRRRG WAFKNPDTIE 180
QCRREGFSQK MQEQKNEGCQ VYGFLEVNKV AGNFHFAPGK SFQQSHVHVH DLQSFGLDNI 240
NMTHYIQHLS FGEDYPGIVN PLDHTNVTAP QASMMFQYFV KVVPTVYMKV DGEVLRTNQF 300
SVTRHEKVAN GLLGDQGLPG VFVLYELSPM MVKLTEKHRS FTHFLTGVCA IIGGMFTVAG 360
LIDSLIYHSA RAIQKKIDLG KTT 383 
Gene Ontology
 GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
 GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW. 
Interpro
 IPR012936; Erv_C. 
Pfam
 PF07970; COPIIcoated_ERV 
SMART
  
PROSITE
  
PRINTS