CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003463
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA adenine methylase 
Protein Synonyms/Alias
 DNA adenine methyltransferase; Deoxyadenosyl-methyltransferase; M.EcoDam 
Gene Name
 dam 
Gene Synonyms/Alias
 b3387; JW3350 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
22YPLLDDIKRHLPKGEacetylation[1]
100QFREEFNKSQDPFRRacetylation[1]
140VPFGRYKKPYFPEAEacetylation[1]
259SSNGGTRKKVDELLAacetylation[1]
269DELLALYKPGVVSPAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Methylates DNA within the sequence GATC and protects the DNA from cleavage by the restriction endonuclease MboI. Although it shares sequence specificity with a number of type II restriction endonucleases and methylases, it is thought to act in postreplication mismatch repair rather than as a part of a restriction modification system. May also play a role in DNA replication. 
Sequence Annotation
 BINDING 10 10 S-adenosyl-L-methionine (By similarity).
 BINDING 14 14 S-adenosyl-L-methionine; via amide
 BINDING 54 54 S-adenosyl-L-methionine (By similarity).
 BINDING 181 181 S-adenosyl-L-methionine (By similarity).  
Keyword
 3D-structure; Complete proteome; DNA replication; Methyltransferase; Reference proteome; S-adenosyl-L-methionine; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 278 AA 
Protein Sequence
MKKNRAFLKW AGGKYPLLDD IKRHLPKGEC LVEPFVGAGS VFLNTDFSRY ILADINSDLI 60
SLYNIVKMRT DEYVQAAREL FVPETNCAEV YYQFREEFNK SQDPFRRAVL FLYLNRYGYN 120
GLCRYNLRGE FNVPFGRYKK PYFPEAELYH FAEKAQNAFF YCESYADSMA RADDASVVYC 180
DPPYAPLSAT ANFTAYHTNS FTLEQQAHLA EIAEGLVERH IPVLISNHDT MLTREWYQRA 240
KLHVVKVRRS ISSNGGTRKK VDELLALYKP GVVSPAKK 278 
Gene Ontology
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0009007; F:site-specific DNA-methyltransferase (adenine-specific) activity; IDA:EcoliWiki.
 GO:0006261; P:DNA-dependent DNA replication; IMP:EcoliWiki.
 GO:0006298; P:mismatch repair; IDA:EcoliWiki. 
Interpro
 IPR023095; Ade_MeTrfase_dom_2.
 IPR002052; DNA_methylase_N6_adenine_CS.
 IPR012263; M_m6A_EcoRV.
 IPR012327; MeTrfase_D12. 
Pfam
 PF02086; MethyltransfD12 
SMART
  
PROSITE
 PS00092; N6_MTASE 
PRINTS
 PR00505; D12N6MTFRASE.