CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018309
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 NudC domain-containing protein 2 
Protein Synonyms/Alias
  
Gene Name
 NUDCD2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
65GREILKGKLFDSTIAubiquitination[1]
121VQDQMQRKLTLERFQubiquitination[1]
129LTLERFQKENPGFDFubiquitination[1, 2]
147EISGNYTKGGPDFSNubiquitination[1, 2, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 May regulate the LIS1/dynein pathway by stabilizing LIS1 with Hsp90 chaperone. 
Sequence Annotation
 DOMAIN 14 104 CS.
 MOD_RES 145 145 Phosphotyrosine (By similarity).  
Keyword
 Centromere; Chromosome; Complete proteome; Cytoplasm; Cytoskeleton; Kinetochore; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 157 AA 
Protein Sequence
MSAPFEERSG VVPCGTPWGQ WYQTLEEVFI EVQVPPGTRA QDIQCGLQSR HVALSVGGRE 60
ILKGKLFDST IADEGTWTLE DRKMVRIVLT KTKRDAANCW TSLLESEYAA DPWVQDQMQR 120
KLTLERFQKE NPGFDFSGAE ISGNYTKGGP DFSNLEK 157 
Gene Ontology
 GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
 GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
 GO:0005622; C:intracellular; IDA:LIFEdb.
 GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
 GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell. 
Interpro
 IPR007052; CS-like_domain.
 IPR017447; CS_domain.
 IPR008978; HSP20-like_chaperone. 
Pfam
 PF04969; CS 
SMART
  
PROSITE
 PS51203; CS 
PRINTS