CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038959
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Voltage-dependent N-type calcium channel subunit alpha-1B 
Protein Synonyms/Alias
  
Gene Name
 Cacna1b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
1127EGQAEGKKEAEADDVubiquitination[1]
1841QCDAELRKEISSVWAubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
  
Sequence Annotation
  
Keyword
 Calcium; Calcium channel; Calcium transport; Complete proteome; Ion channel; Ion transport; Membrane; Reference proteome; Transmembrane; Transport; Voltage-gated channel. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 2354 AA 
Protein Sequence
MVRFGDELGG RYGGTGGGER ARGGGAGGAG GPGQGGLPPG QRVLYKQSIA QRARTMALYN 60
PIPVKQNCFT VNRSLFVFSE DNVVRKYAKR ITEWPPFEYM ILATIIANCI VLALEQHLPD 120
GDKTPMSERL DDTEPYFIGI FCFEAGIKII ALGFVFHKGS YLRNGWNVMD FVVVLTGILA 180
TAGTDFDLRT LRAVRVLRPL KLVSGIPSLQ VVLKSIMKAM VPLLQIGLLL FFAILMFAII 240
GLEFYMGKFH KACFPNSTDA EPVGDFPCGK EAPARLCDSD TECREYWPGP NFGITNFDNI 300
LFAILTVFQC ITMEGWTDIL YNTNDAAGNT WNWLYFIPLI IIGSFFMLNL VLGVLSGEFA 360
KERERVENRR AFLKLRRQQQ IERELNGYLE WIFKAEEVML AEEDKNAEEK SPLDAVLKRA 420
ATKKSRNDLI HAEEGEDRFV DLCAAGSPFA RASLKSGKTE SSSYFRRKEK MFRFLIRRMV 480
KAQSFYWVVL CVVALNTLCV AMVHYNQPQR LTTALYFAEF VFLGLFLTEM SLKMYGLGPR 540
SYFRSSFNCF DFGVIVGSIF EVVWAAIKPG TSFGISVLRA LRLLRIFKVT KYWNSLRNLV 600
VSLLNSMKSI ISLLFLLFLF IVVFALLGMQ LFGGQFNFQD ETPTTNFDTF PAAILTVFQI 660
LTGEDWNAVM YHGIESQGGV SKGMFSSFYF IVLTLFGNYT LLNVFLAIAV DNLANAQELT 720
KDEEEMEEAA NQKLALQKAK EVAEVSPMSA ANISIAAFVK QTRGTVSRSS SVSSVNSPQQ 780
NSAKARSVWE QRASQLRLQN LRASCEALYS EMDPEERLRY ASTRHVRPDM KTHMDRPLVV 840
EPGRDGLRGP AGNKSKPEGT EATEGADPPR RHHRHRDRDK TSASTPAGGE QDRTDCPKAE 900
STETGAREER ARPRRSHSKE APGADTQVRC ERSRRHHRRG SPEEATEREP RRHRAHRHAQ 960
DSSKEGKEGT APVLVPKGER RARHRGPRTG PRETENSEEP TRRHRAKHKV PPTLEPPERE 1020
VAEKESNVVE GDKETRNHQP KEPRCDLEAI AVTGVGSLHM LPSTCLQKVD EQPEDADNQR 1080
NVTRMGSQPS DPSTTVHVPV TLTGPPGEAT VVPSANTDLE GQAEGKKEAE ADDVLRRGPR 1140
PIVPYSSMFC LSPTNLLRRF CHYIVTMRYF EMVILVVIAL SSIALAAEDP VRTDSFRNNA 1200
LKYMDYIFTG VFTFEMVIKM IDLGLLLHPG AYFRDLWNIL DFIVVSGALV AFAFSGSKGK 1260
DINTIKSLRV LRVLRPLKTI KRLPKLKAVF DCVVNSLKNV LNILIVYMLF MFIFAVIAVQ 1320
LFKGKFFYCT DESKELERDC RGQYLDYEKE EVEAQPRQWK KYDFHYDNVL WALLTLFTVS 1380
TGEGWPMVLK HSVDATYEEQ GPSPGFRMEL SIFYVVYFVV FPFFFVNIFV ALIIITFQEQ 1440
GDKVMSECSL EKNERACIDF AISAKPLTRY MPQNKQSFQY KTWTFVVSPP FEYFIMAMIA 1500
LNTVVLMMKF YDAPYEYELM LKCLNIVFTS MFSLECILKI IAFGVLNYFR DAWNVFDFVT 1560
VLGSITDILV TEIAESNNFI NLSFLRLFRA ARLIKLLRQG YTIRILLWTF VQSFKALPYV 1620
CLLIAMLFFI YAIIGMQVFG NIALDDGTSI NRHNNFRTFL QALMLLFRSA TGEAWHEIML 1680
SCLGNRACDP HANASECGSD FAYFYFVSFI FLCSFLMLNL FVAVIMDNFE YLTRDSSILG 1740
PHHLDEFIRV WAEYDPAACG RISYNDMFEM LKHMSPPLGL GKKCPARVAY KRLVRMNMPI 1800
SNEDMTVHFT STLMALIRTA LEIKLAPAGT KQHQCDAELR KEISSVWANL PQKTLDLLVP 1860
PHKPDEMTVG KVYAALMIFD FYKQNKTTRD QTHQAPGGLS QMGPVSLFHP LKATLEQTQP 1920
AVLRGARVFL RQKSATSLSN GGAIQTQESG IKESLSWGTQ RTQDVLYEAR APLERGHSAE 1980
IPVGQPGALA VDVQMQNMTL RGPDGEPQPG LESQGRAASM PRLAAETQPA PNASPMKRSI 2040
STLAPRPHGT QLCNTVLDRP PPSQVSHHHH HRCHRRRDKK QRSLEKGPSL SVDTEGAPST 2100
AAGSGLPHGE GSTGCRRERK QERGRSQERR QPSSSSSEKQ RFYSCDRFGS REPPQPKPSL 2160
SSHPISPTAA LEPGPHPQGS GSVNGSPLMS TSGASTPGRG GRRQLPQTPL TPRPSITYKT 2220
ANSSPVHFAE GQSGLPAFSP GRLSRGLSEH NALLQKEPLS QPLASGSRIG SDPYLGQRLD 2280
SEASAHNLPE DTLTFEEAVA TNSGRSSRTS YVSSLTSQSH PLRRVPNGYH CTLGLSTGVR 2340
ARHSYHHPDQ DHWC 2354 
Gene Ontology
 GO:0005891; C:voltage-gated calcium channel complex; IEA:InterPro.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0005245; F:voltage-gated calcium channel activity; IEA:InterPro. 
Interpro
 IPR002048; EF_hand_dom.
 IPR005821; Ion_trans_dom.
 IPR027359; K_channel_four-helix_dom.
 IPR014873; VDCC_a1su_IQ.
 IPR005447; VDCC_N_a1su.
 IPR002077; VDCCAlpha1. 
Pfam
 PF08763; Ca_chan_IQ
 PF00520; Ion_trans 
SMART
 SM01062; Ca_chan_IQ 
PROSITE
 PS50222; EF_HAND_2 
PRINTS
 PR00167; CACHANNEL.
 PR01631; NVDCCALPHA1.