CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030809
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Inactive serine/threonine-protein kinase VRK3 
Protein Synonyms/Alias
 cDNA FLJ53987, highly similar to Serine/threonine-protein kinase VRK3 (EC 2.7.11.1) 
Gene Name
 VRK3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
44SALDVSPKHVLSERSacetylation[1]
44SALDVSPKHVLSERSubiquitination[2, 3]
107FRYCPSGKHVAYVEGubiquitination[3]
Reference
 [1] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Kinase; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 243 AA 
Protein Sequence
MKLHPPPPSP VTQDHRSKSS HSNWFLVLPS LGRSLQSALD VSPKHVLSER SVLQVACRLL 60
DALEFLHENE YVHGNVTAEN IFVDPEDQSQ VTLAGYGFAF RYCPSGKHVA YVEGSRSPHE 120
GDLEFISMDL HKGCGPSRRS DLQSLGYCML KWLYGFLPWT NCLPNTEDIM KQKQKFVDKP 180
GPFVGPCGHW IRPSETLQKY LKVVMALTYE EKPPYAMLRN NLEALLQDLR VSPYDPIGLP 240
MVP 243 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0004672; F:protein kinase activity; IEA:InterPro. 
Interpro
 IPR011009; Kinase-like_dom.
 IPR000719; Prot_kinase_cat_dom. 
Pfam
 PF00069; Pkinase 
SMART
  
PROSITE
 PS50011; PROTEIN_KINASE_DOM 
PRINTS