CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-028854
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 YTH domain family 1, isoform CRA_a 
Protein Synonyms/Alias
 YTH domain family protein 1 
Gene Name
 Ythdf1 
Gene Synonyms/Alias
 mCG_6742 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
527RLENNDNKPVTNSRDubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 586 AA 
Protein Sequence
MSATSVDPQR TKGQDNKGSG WLWRRVSQLA VDPEALPSIL SYSHLQNGSL HQKDAVHDND 60
FEPYLSGQSN PSNSYPSMSD PYLSSYYPPS IGFPYSLSEA PWSTAGDPPI PYLTTYGQLS 120
NGDHHFMHDA VFGQPGGLGN NIYQHRFNFF PENPAFSAWG TSGSQGQQTQ SSAYGSSYTY 180
PPSSLGGTVV DGQTGFHSDS LNKAPGMNSL EQGMVGLKIG DVTTSAVKTV GSVVNSVALT 240
GVLSGNGGTN VNMPVSKPTS WAAIASKPAK PQPKMKTKSG PIVGGALPPP PIKHNMDIGT 300
WDNKGPAPKA SAPQQTPSPQ AAPQPQQVAQ PLPVQPPPLV QPQYQSPQQP LQPRWVAPRN 360
RNAAFGQSGG ANSDSNSVGN AQPTSAPSVE SHPVLEKLKA AHSYNPKEFD WNLKSGRVFI 420
IKSYSEDDIH RSIKYSIWCS TEHGNKRLDG AFRSMSSKGP VYLLFSVNGS GHFCGVAEMK 480
SPVDYGTSAG VWSQDKWKGK FDVKWIFVKD VPNNQLRHIR LENNDNKPVT NSRDTQEVPL 540
EKAKQVLKII ASYKHTTSIF DDFSHYEKRQ EEEEVVRKER QNRNKQ 586 
Gene Ontology
  
Interpro
 IPR007275; YTH_domain. 
Pfam
 PF04146; YTH 
SMART
  
PROSITE
 PS50882; YTH 
PRINTS