CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003641
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S25-B 
Protein Synonyms/Alias
 RP45; S31; YS23 
Gene Name
 RPS25B 
Gene Synonyms/Alias
 RPS31; RPS31B; YLR333C; L8300.10 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
21AAALAGGKKSKKKWSacetylation[1]
21AAALAGGKKSKKKWSubiquitination[2]
46AVILDQEKYDRILKEacetylation[3]
46AVILDQEKYDRILKEubiquitination[2]
52EKYDRILKEVPTYRYacetylation[3]
52EKYDRILKEVPTYRYubiquitination[2]
70SVLVDRLKIGGSLARubiquitination[2]
85IALRHLEKEGIIKPIacetylation[3]
85IALRHLEKEGIIKPIubiquitination[2]
90LEKEGIIKPISKHSKacetylation[3]
90LEKEGIIKPISKHSKubiquitination[2]
94GIIKPISKHSKQAIYubiquitination[2]
97KPISKHSKQAIYTRAubiquitination[2]
Reference
 [1] mChIP-KAT-MS, a method to map protein interactions and acetylation sites for lysine acetyltransferases.
 Mitchell L, Huard S, Cotrut M, Pourhanifeh-Lemeri R, Steunou AL, Hamza A, Lambert JP, Zhou H, Ning Z, Basu A, Côté J, Figeys DA, Baetz K.
 Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):E1641-50. [PMID: 23572591]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, Villén J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [3] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
  
Sequence Annotation
 MOD_RES 2 2 N,N-dimethylproline; by NTM1.  
Keyword
 Complete proteome; Cytoplasm; Direct protein sequencing; Methylation; Reference proteome; Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 108 AA 
Protein Sequence
MPPKQQLSKA AKAAAALAGG KKSKKKWSKK SMKDRAQHAV ILDQEKYDRI LKEVPTYRYV 60
SVSVLVDRLK IGGSLARIAL RHLEKEGIIK PISKHSKQAI YTRAAASE 108 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
 GO:0003735; F:structural constituent of ribosome; IDA:SGD.
 GO:0002181; P:cytoplasmic translation; IC:SGD. 
Interpro
 IPR004977; Ribosomal_S25. 
Pfam
 PF03297; Ribosomal_S25 
SMART
  
PROSITE
  
PRINTS