CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012317
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Beclin-1 
Protein Synonyms/Alias
 Coiled-coil myosin-like BCL2-interacting protein; Protein GT197 
Gene Name
 BECN1 
Gene Synonyms/Alias
 GT197 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
26QRCSQPLKLDTSFKIubiquitination[1]
32LKLDTSFKILDRVTIubiquitination[2, 3]
206EDVEKNRKIVAENLEacetylation[4]
206EDVEKNRKIVAENLEubiquitination[1]
214IVAENLEKVQAEAERubiquitination[1]
237QREYSEFKRQQLELDubiquitination[1]
248LELDDELKSVENQMRubiquitination[1]
263YAQTQLDKLKKTNVFubiquitination[1]
266TQLDKLKKTNVFNATubiquitination[1]
324LANKMGLKFQRYRLVubiquitination[1]
402RMDVEKGKIEDTGGSubiquitination[1, 5]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [4] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786]
 [5] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense. Protects against infection by a neurovirulent strain of Sindbis virus. 
Sequence Annotation
 MOTIF 108 127 BH3.
 MOD_RES 119 119 Phosphothreonine; by DAPK1.  
Keyword
 3D-structure; Antiviral defense; Autophagy; Cell cycle; Cell division; Coiled coil; Complete proteome; Golgi apparatus; Host-virus interaction; Membrane; Phosphoprotein; Polymorphism; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 450 AA 
Protein Sequence
MEGSKTSNNS TMQVSFVCQR CSQPLKLDTS FKILDRVTIQ ELTAPLLTTA QAKPGETQEE 60
ETNSGEEPFI ETPRQDGVSR RFIPPARMMS TESANSFTLI GEASDGGTME NLSRRLKVTG 120
DLFDIMSGQT DVDHPLCEEC TDTLLDQLDT QLNVTENECQ NYKRCLEILE QMNEDDSEQL 180
QMELKELALE EERLIQELED VEKNRKIVAE NLEKVQAEAE RLDQEEAQYQ REYSEFKRQQ 240
LELDDELKSV ENQMRYAQTQ LDKLKKTNVF NATFHIWHSG QFGTINNFRL GRLPSVPVEW 300
NEINAAWGQT VLLLHALANK MGLKFQRYRL VPYGNHSYLE SLTDKSKELP LYCSGGLRFF 360
WDNKFDHAMV AFLDCVQQFK EEVEKGETRF CLPYRMDVEK GKIEDTGGSG GSYSIKTQFN 420
SEEQWTKALK FMLTNLKWGL AWVSSQFYNK 450 
Gene Ontology
 GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:Compara.
 GO:0030425; C:dendrite; IEA:Compara.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0016020; C:membrane; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0043234; C:protein complex; IEA:Compara.
 GO:0005802; C:trans-Golgi network; IEA:Compara.
 GO:0000045; P:autophagic vacuole assembly; IEA:Compara.
 GO:0050435; P:beta-amyloid metabolic process; IEA:Compara.
 GO:0006968; P:cellular defense response; TAS:ProtInc.
 GO:0071275; P:cellular response to aluminum ion; IEA:Compara.
 GO:0000910; P:cytokinesis; IMP:UniProtKB.
 GO:0051607; P:defense response to virus; IEA:UniProtKB-KW.
 GO:0007040; P:lysosome organization; IEA:Compara.
 GO:0043066; P:negative regulation of apoptotic process; TAS:ProtInc.
 GO:0008285; P:negative regulation of cell proliferation; IEA:Compara.
 GO:0048666; P:neuron development; IEA:Compara.
 GO:0016239; P:positive regulation of macroautophagy; IEA:Compara.
 GO:0042493; P:response to drug; IEA:Compara.
 GO:0001666; P:response to hypoxia; IEA:Compara.
 GO:0033197; P:response to vitamin E; IEA:Compara.
 GO:0019048; P:virus-host interaction; IEA:UniProtKB-KW. 
Interpro
 IPR007243; Beclin_fam. 
Pfam
 PF04111; APG6 
SMART
  
PROSITE
  
PRINTS