CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043367
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Ras-related protein Rab-40C 
Protein Synonyms/Alias
  
Gene Name
 RAB40C 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
179TPVHLIDKLPLPVTIubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; GTP-binding; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 237 AA 
Protein Sequence
XLKFLLVGDS DVGKGEILES LQDGAAESPY AYSNGIDYKT TTILLDGRRV KLELWDTSGQ 60
GRFCTIFRSY SRGAQGILLV YDITNRWSFD GIDRWIKEID ERQVPTEQAR AYAEKNCMTF 120
FEVSPLCNFN VIESFTELSR IVLMRHGMEK IWRPNRVFSL QDLCCRAIVS CTPVHLIDKL 180
PLPVTIKSHL KSFSMANGMN AVMMHGRSYS LASGAGGGGS KGNSLKRSKS IRPPQSP 237 
Gene Ontology
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:InterPro.
 GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type.
 IPR001496; SOCS_C. 
Pfam
 PF00071; Ras
 PF07525; SOCS_box 
SMART
 SM00175; RAB
 SM00253; SOCS
 SM00969; SOCS_box 
PROSITE
 PS50225; SOCS 
PRINTS
 PR00449; RASTRNSFRMNG.