Tag | Content |
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CPLM ID | CPLM-008565 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | PDZ and LIM domain protein 1 |
Protein Synonyms/Alias | C-terminal LIM domain protein 1; Elfin; LIM domain protein CLP-36 |
Gene Name | Pdlim1 |
Gene Synonyms/Alias | Clim1; Clp36 |
Created Date | July 27, 2013 |
Organism | Rattus norvegicus (Rat) |
NCBI Taxa ID | 10116 |
Lysine Modification | Position | Peptide | Type | References |
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22 | GFRLVGGKDFEQPLA | acetylation | [1] | 98 | PLVTEEGKRHPYKMN | acetylation | [1] | 103 | EGKRHPYKMNLASEP | acetylation | [1] | 231 | DGKGDPNKPSGFRSV | acetylation | [1] | 307 | GDQIYCEKHARERVT | acetylation | [1] |
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Reference | [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns. Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV. Cell Rep. 2012 Aug 30;2(2):419-31. [ PMID: 22902405] |
Functional Description | Cytoskeletal protein that may act as an adapter that brings other proteins (like kinases) to the cytoskeleton (By similarity). |
Sequence Annotation | DOMAIN 3 85 PDZ. DOMAIN 256 315 LIM zinc-binding. METAL 258 258 Zinc 1 (By similarity). METAL 261 261 Zinc 1 (By similarity). METAL 278 278 Zinc 1 (By similarity). METAL 281 281 Zinc 1 (By similarity). METAL 284 284 Zinc 2 (By similarity). METAL 287 287 Zinc 2 (By similarity). METAL 305 305 Zinc 2 (By similarity). METAL 308 308 Zinc 2 (By similarity). MOD_RES 2 2 N-acetylthreonine (By similarity). MOD_RES 90 90 Phosphoserine (By similarity). MOD_RES 130 130 Phosphoserine (By similarity). MOD_RES 142 142 Phosphotyrosine (By similarity). MOD_RES 319 319 Phosphotyrosine (By similarity). |
Keyword | Acetylation; Complete proteome; Cytoplasm; Cytoskeleton; LIM domain; Metal-binding; Phosphoprotein; Reference proteome; Zinc. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 327 AA |
Protein Sequence | MTTQQIVLQG PGPWGFRLVG GKDFEQPLAI SRVTPGSKAA IANLCIGDLI TAIDGEDTSS 60 MTHLEAQNKI KGCVDNMTLT VSRSEQKIWS PLVTEEGKRH PYKMNLASEP QEVLHIGSAH 120 NRSAMPFTAS PAPGTRVITN QYNSPTGLYS SENISNFNNA VESKTSASGE EANSRPSAQP 180 HPSGGLIIDK ESEVYKMLQE KQELNEPPKQ STSFLVLQEI LESDGKGDPN KPSGFRSVKA 240 PVTKVAASVG NAQKLPICDK CGTGIVGVFV KLRDHHRHPE CYVCTDCGIN LKQKGHFFVG 300 DQIYCEKHAR ERVTPPEGYD VVTVFPK 327 |
Gene Ontology | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell. GO:0005667; C:transcription factor complex; IEA:Compara. GO:0003713; F:transcription coactivator activity; IEA:Compara. GO:0008270; F:zinc ion binding; IEA:InterPro. GO:0006355; P:regulation of transcription, DNA-dependent; IEA:Compara. GO:0001666; P:response to hypoxia; IEP:RGD. |
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