CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024573
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 PHD finger protein 20-like protein 1 
Protein Synonyms/Alias
  
Gene Name
 PHF20L1 
Gene Synonyms/Alias
 CGI-72 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
150QDWIALVKAAAAAAAubiquitination[1, 2, 3]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
 DOMAIN 11 71 Tudor 1.
 DOMAIN 85 141 Tudor 2.
 ZN_FING 681 729 PHD-type.
 MOD_RES 909 909 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1017 AA 
Protein Sequence
MSKKPPNRPG ITFEIGARLE ALDYLQKWYP SRIEKIDYEE GKMLVHFERW SHRYDEWIYW 60
DSNRLRPLER PALRKEGLKD EEDFFDFKAG EEVLARWTDC RYYPAKIEAI NKEGTFTVQF 120
YDGVIRCLKR MHIKAMPEDA KGQDWIALVK AAAAAAAKNK TGSKPRTSAN SNKDKDKDER 180
KWFKVPSKKE ETSTCIATPD VEKKEDLPTS SETFGLHVEN VPKMVFPQPE STLSNKRKNN 240
QGNSFQAKRA RLNKITGLLA SKAVGVDGAE KKEDYNETAP MLEQV 285 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR022255; DUF3776.
 IPR002999; Tudor.
 IPR014002; Tudor-like_plant.
 IPR019786; Zinc_finger_PHD-type_CS.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF12618; DUF3776
 PF00628; PHD 
SMART
 SM00743; Agenet
 SM00249; PHD
 SM00333; TUDOR 
PROSITE
 PS50304; TUDOR
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2 
PRINTS