CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-045610
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Coatomer subunit beta' 
Protein Synonyms/Alias
  
Gene Name
 Copb2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
248RESNSVVKIFKNFKEacetylation[1]
251NSVVKIFKNFKEKKSacetylation[1]
254VKIFKNFKEKKSFKPacetylation[1]
443RDFSMADKVLPTIPKubiquitination[2]
462RVAHFLEKQGFKQQAacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 504 AA 
Protein Sequence
SLKVWQLGSS SPNFTLEGHE KGVNCIDYYS GGDKPYLISG ADDRLVKIWD YQNKTCVQTL 60
EGHAQNVSCA SFHPELPIII TGSEDGTVRI WHSSTYRLES TLNYGMERVW CVASLRGSNN 120
VALGYDEGSI IVKLGREEPA MSMDANGKII WAKHSEVQQA NLKAMGDTEI KDGERLPLAV 180
KDMGSCEIYP QTIQHNPNGR FVVVCGDGEY IIYTALALRT HTFASAQEFA WAHDSSEYAI 240
RESNSVVKIF KNFKEKKSFK PDFGAESIYG GFLLGVRSVN GLAFYDWENT ELIRRIEIQP 300
KHIFWSDSGE LVCIATEESF FILKYLSEKV LAAQETHEGV TEDGIEDAFE VLGEIQEIVK 360
TGLWVGDCFI YTSSVNRLNY YVGGEIVTIA HLDRTMYLLG YIPKDNRLYL GDKELNIVSY 420
SLLVSVLEYQ TAVMRRDFSM ADKVLPTIPK EQRTRVAHFL EKQGFKQQAL TVSTDPEHRF 480
ELALQLGELK IAYQLAVEAE TVQK 504 
Gene Ontology
 GO:0030117; C:membrane coat; IEA:InterPro.
 GO:0005198; F:structural molecule activity; IEA:InterPro.
 GO:0006886; P:intracellular protein transport; IEA:InterPro.
 GO:0016192; P:vesicle-mediated transport; IEA:InterPro. 
Interpro
 IPR006692; Coatomer_WD-assoc_reg.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF04053; Coatomer_WDAD
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS