CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015826
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 E3 ubiquitin-protein ligase UHRF2 
Protein Synonyms/Alias
 NIRF; Np95-like ring finger protein; Nuclear protein 97; Nuclear zinc finger protein Np97; Ubiquitin-like PHD and RING finger domain-containing protein 2; Ubiquitin-like-containing PHD and RING finger domains protein 2 
Gene Name
 Uhrf2 
Gene Synonyms/Alias
 Nirf 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
438MACVGRTKECTIVPSacetylation[1]
549CDAPLDDKIGAESRNubiquitination[2]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 E3 SUMO-, but not ubiquitin-, protein ligase for ZNF131 (By similarity). E3 ubiquitin-protein ligase that is an intermolecular hub protein in the cell cycle network. Ubiquitinates cyclins, CCND1 and CCNE1, in an apparently phosphorylation-independent manner and induces G1 arrest. Also ubiquitinates PCNP leading to its degradation by the proteasome. Through cooperative DNA and histone binding, may contribute to a tighter epigenetic control of gene expression in differentiated cells. 
Sequence Annotation
 DOMAIN 1 78 Ubiquitin-like.
 DOMAIN 449 613 YDG.
 ZN_FING 340 396 PHD-type.
 ZN_FING 734 773 RING-type.
 REGION 118 312 Required for interaction with histone H3.
 REGION 195 289 Interaction with PCNP (By similarity).
 REGION 415 645 Methyl-CpG binding and interaction with
 MOD_RES 668 668 Phosphoserine.
 DISULFID 705 705 Interchain (By similarity).  
Keyword
 Alternative splicing; Cell cycle; Complete proteome; Disulfide bond; DNA-binding; Ligase; Metal-binding; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation; Ubl conjugation pathway; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 803 AA 
Protein Sequence
MWIQVRTIDG SQTRTIEDVS RKATIEELRE RVWALFDVRP ECQRLFYRGK QLENGYTLFD 60
YDVGLNDIIQ LLVRPDSSLP STSKQNDAQV KPSSHNPPKV KKTARGGSSS QPSTSARTCL 120
IDPGFGLYKV NELVDARDVG LGAWFEAHIH SVTRASDGHS RGKTPLKNGS SYKRTNGNVN 180
HNSKENTNKL DNVPSTSNSD SVAADEDVIY HIEYDEYPES GILEMNVKDL RPRARTILKW 240
NELNVGDVVM VNYNVENPGK RGFWYDAEIT TLKTISRTKK EVRVKVFLGG SEGTLNDCRV 300
MSVDEIFKIE KPGAHPISFA DGKFLRKNDP ECDLCGGDPD KTCHMCSCHK CGEKRDPNMQ 360
LLCDECNMAY HIYCLSPPLD KVPEEEYWYC PSCKTDSSEV VKAGERLKLS KKKAKMPSAS 420
TESRRDWGRG MACVGRTKEC TIVPSNHYGP IPGIPVGSTW RFRVQVSEAG VHRPHVGGIH 480
GRSNDGAYSL VLAGGFEDEV DRGDEFTYTG SGGKNLAGNK RIGAPSADQT LTNMNRALAL 540
NCDAPLDDKI GAESRNWRAG KPVRVIRSFK GRKISKYAPE EGNRYDGIYK VVKYWPEISS 600
SHGFLVWRYL LRRDDVEPAP WTSEGIERSR RLCLRLQYPA GYPSEKEGKK TKGQSKKQGS 660
EATKRPASDD ECPGDSKVLK ASDSTDAVEA FQLTPQQQRL IREDCQNQKL WDEVLASLVE 720
GPNFLKKLEQ SFMCVCCQEL VYQPVTTECF HNVCKDCLQR SFKAQVFSCP ACRHDLGQNY 780
VMVLNETLQT LLDLFFPGYS KGR 803 
Gene Ontology
 GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0042393; F:histone binding; IDA:UniProtKB.
 GO:0004842; F:ubiquitin-protein ligase activity; ISS:HGNC.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
 GO:0030154; P:cell differentiation; ISS:HGNC.
 GO:0008283; P:cell proliferation; ISS:HGNC.
 GO:0071158; P:positive regulation of cell cycle arrest; ISS:UniProtKB.
 GO:0051865; P:protein autoubiquitination; ISS:HGNC.
 GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:HGNC. 
Interpro
 IPR021991; DUF3590.
 IPR014722; Rib_L2_dom2.
 IPR003105; SRA_YDG.
 IPR000626; Ubiquitin.
 IPR019955; Ubiquitin_supergroup.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD.
 IPR017907; Znf_RING_CS. 
Pfam
 PF12148; DUF3590
 PF00628; PHD
 PF00240; ubiquitin
 PF02182; YDG_SRA 
SMART
 SM00249; PHD
 SM00184; RING
 SM00466; SRA
 SM00213; UBQ 
PROSITE
 PS00299; UBIQUITIN_1
 PS50053; UBIQUITIN_2
 PS51015; YDG
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2
 PS00518; ZF_RING_1
 PS50089; ZF_RING_2 
PRINTS