CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018408
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Xni 
Protein Synonyms/Alias
  
Gene Name
 xni 
Gene Synonyms/Alias
 ygdG; STM2972 
Created Date
 July 27, 2013 
Organism
 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) 
NCBI Taxa ID
 99287 
Lysine Modification
Position
Peptide
Type
References
216EVPEKWRKKLETHKEacetylation[1]
222RKKLETHKEMAFLCRacetylation[1]
Reference
 [1] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786] 
Functional Description
 May have a role in processing of nucleic acids. It is probably not an exonuclease; metal-binding residues found in paralogs are missing (By similarity). 
Sequence Annotation
 DOMAIN 160 249 5'-3' exonuclease.  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 251 AA 
Protein Sequence
MAAHLLIVDA LNLIRRIHAV QGSPCVETCQ HALDQLIIHS QPTHAVAVFD DDARSSGWRH 60
QRLPDYKAGR PPMPDDLHNE MPALRAAFEQ RGVRCWASDG NEADDLAATL ALKVTEAGHQ 120
ATIVSTDKGY CQLLSPGLRI RDYFQKRWLD APFIEKEFGV LPRQLPDYWG LAGISSSKVP 180
GVAGIGPKSA TQLLIQFQNL EGIYAHLDEV PEKWRKKLET HKEMAFLCRD IARLQTDLHI 240
DGNLQQLRLA R 251 
Gene Ontology
 GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0008152; P:metabolic process; IEA:GOC. 
Interpro
 IPR020046; 5-3_exonucl_a-hlix_arch_N.
 IPR020045; 5-3_exonuclease_C.
 IPR002421; 5-3_exonuclease_N.
 IPR008918; HhH2.
 IPR022895; Uncharacterised_YgdG. 
Pfam
 PF01367; 5_3_exonuc
 PF02739; 5_3_exonuc_N 
SMART
 SM00475; 53EXOc
 SM00279; HhH2 
PROSITE
  
PRINTS