CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011760
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Spermidine synthase 
Protein Synonyms/Alias
 SPDSY; Putrescine aminopropyltransferase 
Gene Name
 SPE3 
Gene Synonyms/Alias
 YPR069C; YP9499.24C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
31PGQAMTLKVEKVLHHubiquitination[1]
42VLHHEKSKYQDVLIFacetylation[2]
129EAVIRLSKEYLPEMAacetylation[2]
265LREISDEKEAELYRYacetylation[2]
265LREISDEKEAELYRYubiquitination[1]
276LYRYYNKKIHEASFVubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
  
Sequence Annotation
 REGION 150 151 S-adenosylmethioninamine binding (By
 REGION 168 171 Putrescine binding (By similarity).
 ACT_SITE 168 168 Proton acceptor (By similarity).
 BINDING 44 44 S-adenosylmethioninamine (By similarity).
 BINDING 74 74 Putrescine (By similarity).
 BINDING 75 75 S-adenosylmethioninamine (By similarity).
 BINDING 99 99 S-adenosylmethioninamine (By similarity).
 BINDING 119 119 S-adenosylmethioninamine (By similarity).
 BINDING 168 168 S-adenosylmethioninamine (By similarity).
 BINDING 236 236 Putrescine (By similarity).  
Keyword
 Complete proteome; Reference proteome; Spermidine biosynthesis; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 293 AA 
Protein Sequence
MAQEITHPTI VDGWFREISD TMWPGQAMTL KVEKVLHHEK SKYQDVLIFK STTYGNVLVL 60
DNVIQATERD EFAYQEMIAH LALNSHPNPK KVLVIGGGDG GVLREVVKHD SVEEAWLCDI 120
DEAVIRLSKE YLPEMAASYS HPKVKTHIGD GFQFLRDYQN TFDVIITDSS DPEGPAETLF 180
QKEYFQLLNS ALTEKGVITT QAESMWIHLP IIKDLKKACS EVFPVAEYSF VTIPTYPTGT 240
IGFMVCSKDK TCNVKKPLRE ISDEKEAELY RYYNKKIHEA SFVLPTWAAK ELN 293 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0004766; F:spermidine synthase activity; IMP:SGD.
 GO:0015940; P:pantothenate biosynthetic process; IMP:SGD.
 GO:0008295; P:spermidine biosynthetic process; IMP:SGD. 
Interpro
 IPR001045; Spermidine/spermine_synthase. 
Pfam
 PF01564; Spermine_synth 
SMART
  
PROSITE
 PS01330; SPERMIDINE_SYNTHASE_1
 PS51006; SPERMIDINE_SYNTHASE_2 
PRINTS