CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035531
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Vps13c 
Protein Synonyms/Alias
  
Gene Name
 Vps13c 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
1250VNPPVIDKMKVQLTKacetylation[1]
1252PPVIDKMKVQLTKLKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 3701 AA 
Protein Sequence
MVLESVVADL LNRFLGDYVE NLNKSQLKLG IWGGNVALDN LQIKENALSE LDVPFKVKAG 60
QIDKLTLKIP WKNLYGEAVV ATLEGLYLLV VPGASIKYDA EKEEKSLQDI KQKELCRIEE 120
ALQKAAEKGA HGEFMYGLES LLYKDVKPGR KRKKHKKHFK KRFKGLDRSK DKPKEAKKDT 180
FLEKLATQVI KNVQVKITDI HIKYEDDVTD PERPLSFGVT LREFSLLTTN EHWTPCILNE 240
AEKIIYKLVK LDSLSAYWNV GCCVSYRGSR EHILDQLKCE ILTSTNIPPD HQYIFQPISA 300
SAKLYMNPGA ESEFKTPKLD GNVEVQNIAI ELTKPQYLSM IDFLESLDYM VRNAPYRKYR 360
PCLPLHTDCR QWWKYAIDSV LEVHIRRYTR PWSWNNIKNH RQLLKSYKMA YKNKLTQTKV 420
SEEIQKQIQD LEKSLDVFNI ILVRQQAQVE VIHSGQKLRK KSSEAGEKRG WFSGFWGKKE 480
CKKRDEESSV PETIDDLMTP EEKDKLFTAI GYSENAYNLA LPKQYVAHIL TLKLLSTSIV 540
VRENRNVPEI LRIQIIGLGT QVSQRPGAQA LKIEAKLEHW YVTGLRQQDI VPSLVASIGD 600
TTSSLLKIEF ETNPENSPAD QTLIVQSQPV EVIYDAKTIN AVVEFFQSNK GLDLEQITSA 660
TLMKLEEIKA RTATGLTHII ETRKVLDLRI NLKPSYLIIP QTGFHHEKSN LLILDFGTFQ 720
LNSKDQGAQK TTNSSLEEII DKAYDKFDVE IKSVQLLFAK AVLFKVSGGL PLMHVRISDQ 780
KIRDALCLIN SIPLPQKSST QSPERQVASI PVLSGGTKVL LGTSLLLDGV ESESDDEYFD 840
AEDGDSQAAR PVKASELRKA AEVPNEELVT LLLKFEIKEV VLELTKQQKE EETILVFNVT 900
QLGTEATMRT FDLTAVSYLR KISLDYHEIK GSRKKPIHLV SSSDRPGLDL LKVEYIKVDR 960
NGPSFQTTFE KTEQTVKVAF SSLNLLLQTQ ALLSSLNYLT TVIPSDSQNA GVAKEVQTIT 1020
EKQKNSPLQK VMVPSRDSDV IGFRLFAKLN AFCVTVCDEK SNIAEIKIQG LDSSLSLQSK 1080
KQSLFARLEN IIVTDVDPKT VHKKAVSIVG NEVFRFNLDL YPDATEGDSY TDMSTVDGVV 1140
ALHVGCIQIV YLHKFLMSLL SFLNNFQVAK EALSAATAQA AEKAATSVKD LAQRSFRVSV 1200
DIDLKAPVIV IPQSSLSTNA VVVDLGLIRV HNQFSLVSGE DAVNPPVIDK MKVQLTKLKL 1260
CRTAIQSGVS HPDIQLLHPI NLEFCVNRNL AANWYHKVPV VEIKGRLDSM NVSLNQEDLN 1320
LLFRILAENL GEATEDIDKG KPRIQEIGKT KACQDVSTPQ DVHTTQGVPA ARVEETRPVD 1380
IINVLLNFEI KEVVVTLMKK AEKKGNPLHE LKILHLGMEA KVKAHDMTAK AYLRKITMRC 1440
FDFPDSKGEP LHIVNSSDVS DGTLLTMLFI KADSDGPDFQ TIHDNTKQKL KVSFSSLDLV 1500
LHLEALLSLM DFLSCAVPSP DSSSSETESE LKPLVGGSRS LAVKAVPSSS EGDVFDLKVT 1560
AELNAFNIFI CDQKSNIAEI KIHGMDASVS MKAKQTDVFA RLKNIIVMNV DSLSIHKKAV 1620
SILGDEVFRF QMSLYPDATE GENYGDMSKV DGRLGLKVGC IQIVYVHKFF MSLLSFLNNF 1680
QAAKEALSTA TVQAAERAAS SVKDLAQKSF RLLMDIDLKA PVITIPQSSV SPNVVIADLG 1740
LIRVENKFSL VSVEQLSLPP VADKMSVQLT QLKLSRTVLQ ADSPQHDIEI LKPVNMLLSI 1800
QRNLSAAWYT QIPGMEITGK LKPMQVALSQ DDLTVLMKIL LENLGEASSQ PSPTQFAQEA 1860
ARVKRDTRSG PDCLKEQDLA EPKPPGDQTV TLQFDFHFDS LSIVLYNSDG CQESRLSFHN 1920
DSFRLGELTL HLMASAGKMF KDGSMNVSLK LKTCTLDDLR EGIERATSRM IDKKNDQDGN 1980
SSMIDVSYSQ DKNGSQIDAV LDKLYVCASV EFLMTVADFF IKAMPESPEN IAKDIQIPSR 2040
KTAPGRVKME KDDSVKPNMT LKAMITDPEV VFVANLTKAD APALTASFQC NLSLSTSKLE 2100
QMMEASVRDL KVLACPFLRE RRGKSVTTVL QPCSLFMEKC TWASGKQNIN VMVKEFVIKI 2160
SPIILNTVMT IMAALSPKTK EEDQEDTAEE KDSLWAIKPI TDYNSWFLGV DMATEATESF 2220
RDFEHTQIEE NCVVAVESVQ VTLECGLGHR TVPLLLAESR FSGNIKNWTS LMAAAADMTL 2280
EVHYYNETHA VWEPLIERVE GKTPWSLKLN VKKNPLQDKS LMPGDDFIPE PHTAVHISSG 2340
STMNITISKS CLNVFNNLAK GFSEGAASTF DYSLKDRAPF TVRNALGVPM KLQDPNRILR 2400
VMGSPEKSVI HSLTAPPTLS LLVCSISPSQ GDSSIPTWAL LVTELLWILP HGYTEVASVP 2460
VARPGRRLYN VRNPSASRSD SVLVQIDATE GNKVVTLRSP LQIKNHFSIA FIIYKFVKNV 2520
KLLERIGIVK PEEEFHVPLD SYRCQLYVQP AGSLEQQYTQ STTYISWKEE LHRSREVRCM 2580
LQCPAVEVNF LPLIVNTVAL PDELSYIGAH GEDWDPAYII HLYPPLTLRN LLPYSIRYLL 2640
EGTAEAHELA EGSSADVLHS RISGEIIELV LVKYLGKNWN GHFRICDTLP EFFLVCFSSD 2700
TAEVLTVDLS VHVRRIGCRM ELSVFSPYWL INKTSRVLQY RSEEIHVKHP ADFRDIILFS 2760
FKKKNIFSKN KVQLKISTSA WSNGFSLDTV GSYGCVKCPA TTMEYLVGVS IKMSSFNLSR 2820
IVTLTPFCTV ANKSSLELEV GEIASDGSIP TNKWHYIASS ECIPFWPENL SGKLCVRVVG 2880
YEGSSKPFFY NRQDNGTLLS LEDLNGGILV DINTAEHSTV ITFSDYHEGS APALIMNHTQ 2940
WNVLTYKQSG SQEALVLLPG ETRLFAWADP TGTRKLTWSY AANFGEHDLL KDECGQFPYD 3000
ANIQIHWVSF LDGRQRVLLF TDDVALVSKA LQAEEMEQAD LEVALSLHSL GLSLVNNENK 3060
QEVSYVGVTS SGVVWEMKPK QKWKPFSQKQ IMLLEQSYQK HLTSQDRGWI KLDSNFEVNF 3120
DKVPMEMRLP LRCPIKRDFL SGIQVEFKQS PHQRSLRARL YWLQVDNQLP GTMFPVVFHP 3180
VAPPKSIALD SEPKPFIDVS VITRFNEYSK VLQFKYFMVL IQEMALKVDQ GFLGAVIALF 3240
TPTSDPEAER KRTKLIQQDI DALNTELLES SMSDMSILSF FEHFHISPVK LHLSLSLGSG 3300
GEESDKEKQE MIAIHSVNLL LKSIGATLTD VDDLIFKLAY YEIRYQFYKR DQLMWSVVRH 3360
YSEQFLKQMY VLVLGLDVLG NPFGLIRGLS EGVEALFYEP FQGAVQGPEE FAEGLVIGVR 3420
SLFGHTVGGA AGVVSRITGS VGKGLAAITM DKEYQQKRRE EMGRQPKDFG DSLARGGKGF 3480
LRGVVGGVTG IITKPVEGAK KEGAAGFFKG IGKGLVGAVA RPTGGIIDMA SSTFQGIQRV 3540
AESTEEVSSL RPPRLIHEDG IIRPYDRQES EGSDLLENQI KKLEGEAYQF HCTVPGNKRA 3600
VLMITNRRVL FIKEVEILGH MSVDWQCLFE DFLCPPGVSE NLLKISVKEQ GLFHKKDSAN 3660
VGYLRKIYLK DPITAKRAFE AIESAQSARQ QQRLMRQSSV K 3701 
Gene Ontology
  
Interpro
 IPR015412; Autophagy-rel_C.
 IPR026847; VPS13.
 IPR026854; VPS13A_N.
 IPR009543; VPSAP_dom. 
Pfam
 PF09333; ATG_C
 PF12624; Chorein_N
 PF06650; DUF1162 
SMART
  
PROSITE
  
PRINTS