CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022712
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 E3 ubiquitin-protein ligase RNF25 
Protein Synonyms/Alias
 RING finger protein 25; RING finger protein AO7 
Gene Name
 Rnf25 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
119MLYELIEKGKEILTDubiquitination[1]
331QRPGETQKSVLDPPRubiquitination[1]
353QYDRRHPKGGECCTPubiquitination[1]
361GGECCTPKGTSEIHEubiquitination[1]
374HELPPPEKPLKETVDubiquitination[1]
377PPPEKPLKETVDLKAubiquitination[1]
398LTGHPQEKGPGSWQGubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of NKD2. Stimulates transcription mediated by NF-kappa-B (By similarity). 
Sequence Annotation
 DOMAIN 18 127 RWD.
 ZN_FING 134 199 RING-type.  
Keyword
 Complete proteome; Ligase; Metal-binding; Reference proteome; Ubl conjugation; Ubl conjugation pathway; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 456 AA 
Protein Sequence
MAASASTAAG EEDWVLPSEV EVLESIYLDE LQVMKGNGRS PWEIFITLHP ATAEVQDSQF 60
VCFTLVLRIP VQYPHEVPQI SIRNPRGLSD EQIHKISQAL GHVAKEGLGT AMLYELIEKG 120
KEILTDNNIP HGQCVICLYG FQEKEAFTKT PCYHYFHCHC LARYIQHMEQ ELTTQEQEQE 180
RQHVVTKQKA VGVQCPVCRE PLVYDLASLK AAPEPQQPME LYQPSAESLR QQEELKLLYQ 240
RQQEKGGIID LEAERNRYFI SLQQPPAALE PESAVDVSRE PQPPNALSAE QSTSLADQST 300
LPTSLPMTTQ YTYEKTSGAG PNQQRPGETQ KSVLDPPRHG RGSWRQYDRR HPKGGECCTP 360
KGTSEIHELP PPEKPLKETV DLKAEPRNKG LTGHPQEKGP GSWQGPSARR TRDCARWERS 420
KNRTPGSCYP HLPRGQGAYR SGTRREPLGL ESEEGS 456 
Gene Ontology
 GO:0005829; C:cytosol; ISS:UniProtKB.
 GO:0005634; C:nucleus; ISS:UniProtKB.
 GO:0051059; F:NF-kappaB binding; ISS:UniProtKB.
 GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:UniProtKB. 
Interpro
 IPR006575; RWD-domain.
 IPR016135; UBQ-conjugating_enzyme/RWD.
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF05773; RWD
 PF13639; zf-RING_2 
SMART
 SM00184; RING
 SM00591; RWD 
PROSITE
 PS50908; RWD
 PS00518; ZF_RING_1
 PS50089; ZF_RING_2 
PRINTS