CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015239
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DENN domain-containing protein 5A 
Protein Synonyms/Alias
 Rab6-interacting protein 1; Rab6IP1 
Gene Name
 Dennd5a 
Gene Synonyms/Alias
 Rab6ip1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
628LRTSMYQKCTTVDEAubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Guanine nucleotide exchange factor (GEF) which may activate RAB6A and RAB39A and/or RAB39B. Promotes the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form (By similarity). 
Sequence Annotation
 DOMAIN 68 138 UDENN.
 DOMAIN 202 390 DENN.
 DOMAIN 512 588 dDENN.
 DOMAIN 787 950 RUN 1.
 DOMAIN 954 1062 PLAT.
 DOMAIN 1134 1280 RUN 2.
 MOD_RES 193 193 Phosphoserine (By similarity).  
Keyword
 3D-structure; Complete proteome; Golgi apparatus; Guanine-nucleotide releasing factor; Membrane; Phosphoprotein; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1287 AA 
Protein Sequence
MSGGGGGGGS APSRFADYFV ICGLDTETGL EPDELSALCQ YIQASKARDG ASPFISSTTE 60
GENFEQTPLR RTFKSKVLAR YPENVDWNPF DQDAVGMLCM PKGLAFKTQA DPREPQFHAF 120
IITREDGSRT FGFALTFYEE VTSKQICSAM QTLYHMHNAE YDVLHAPLAD GGDQSGMEDG 180
EGIPGTKLQR FNSYDISRDT LYVSKCICLI TPMSFMKACR SVLQQLHQAV TSPQPPPLPL 240
ESYIYNVLYE VPLPPPGRSL KFSGVYGPII CQRPSTNELP LFDFPVKEVF ELLGVENVFQ 300
LFTCALLEFQ ILLYSQHYQR LMTVAETITA LMFPFQWQHV YVPILPASLL HFLDAPVPYL 360
MGLHSNGLDD RSKLELPQEA NLCFVDVDNH FIELPEDLPQ FPNKLEFVQE VSEILMAFGV 420
PPEGNLHCSE SASKLKRIRA SELVSDKRNG NIAGSPLHSY ELLKENETIA RLQALVKRTG 480
VSLEKLEVRE DPSSNKDFKV QCDEEELRIY QLNIQIREVF ANRFTQMFAD YEVFVIQPSQ 540
DKESWFTNRE QMQNFDKASF LSDQPEPYLP FLSRFLETQM FASFIDNKIM CHDDDDKDPV 600
LRVFDSRVDK IRLLNVRTPT LRTSMYQKCT TVDEAEKAIE LRLAKIDHTA VHPHLLDMKI 660
GQGKYEPGFF PKLQSDVLCT GPASNKWTKR NAPAQWRRKD RQKQHTEHLR LDNDQREKYI 720
QEARNMGSTI RQPKLSNLSP SVIAQTNWKF VEGLLKECRN KTKRMLVEKM GREAVELGHG 780
EVNITGVEEN TLIASLCDLL ERIWSHGLQV KQGKSALWSH LLHYQENRQR KLTSGSLSTS 840
GILLDSERRK SDASAVMSPL RISLIQDMRH IQNIGEIKTD VGKARAWVRL SMEKKLLSRH 900
LKQLLSDHEL TKKLYKRYAF LRCDDEKEQF LYHLLSFNAV DYFCFTNVFT TILIPYHILI 960
VPSKKLGGSM FTANPWICIS GELGETQILQ IPRNVLEMTF ECQNLGKLTT VQIGHDNSGL 1020
YAKWLVECVM VRNEVTGHTY KFPCGRWLGK GMDDGSLERV LVGELLTSLP EVDERPCRTP 1080
PLQQSPSVIR RLVTISPNNK PKLNTGQIQE SIGEAVNGIV KHFHKPEKER GSLTLLLCGE 1140
CGLVSALEQA FQHGFKSPRL FKNVFIWDFL EKAQTYYETL EQNDVVPEEN WHTRARNFCR 1200
FVTAVNNTPR NIGKDGKFQM LVCLGARDHL LHHWIALLAD CPITAHMYED VALIKDHTLV 1260
NSLIRVLQTL QEFNITLDTS LVKGIDI 1287 
Gene Ontology
 GO:0005794; C:Golgi apparatus; IDA:UniProtKB.
 GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
 GO:0016020; C:membrane; IBA:RefGenome.
 GO:0017137; F:Rab GTPase binding; IDA:MGI.
 GO:0017112; F:Rab guanyl-nucleotide exchange factor activity; ISS:UniProtKB. 
Interpro
 IPR005112; dDENN_dom.
 IPR001194; DENN_dom.
 IPR008976; Lipase_LipOase.
 IPR001024; LipOase_LH2.
 IPR004012; Run.
 IPR005113; uDENN_dom. 
Pfam
 PF03455; dDENN
 PF02141; DENN
 PF01477; PLAT
 PF02759; RUN
 PF03456; uDENN 
SMART
 SM00801; dDENN
 SM00799; DENN
 SM00593; RUN
 SM00800; uDENN 
PROSITE
 PS50947; DDENN
 PS50211; DENN
 PS50095; PLAT
 PS50826; RUN
 PS50946; UDENN 
PRINTS