CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022636
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Calcium-binding mitochondrial carrier protein Aralar2 
Protein Synonyms/Alias
 Citrin; Mitochondrial aspartate glutamate carrier 2; Solute carrier family 25 member 13 
Gene Name
 Slc25a13 
Gene Synonyms/Alias
 Aralar2 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
18RADPAELKAIFLKYAacetylation[1, 2]
18RADPAELKAIFLKYAubiquitination[3]
29LKYASIEKNGEFFMSubiquitination[3]
104QLFDKAGKGEVTFEDacetylation[4]
177RDNAKTGKVSAIDFRacetylation[5]
177RDNAKTGKVSAIDFRphosphoglycerylation[6]
235NNMELIRKIYSTLAGacetylation[2]
245STLAGNRKDVEVTKEacetylation[7]
251RKDVEVTKEEFALAAacetylation[7]
251RKDVEVTKEEFALAAubiquitination[3]
354VYPIDLVKTRMQNQRacetylation[2]
354VYPIDLVKTRMQNQRubiquitination[3]
373FVGELMYKNSFDCFKacetylation[2, 5, 7]
380KNSFDCFKKVLRYEGacetylation[7]
406LLGVAPEKAIKLTVNacetylation[2, 5]
406LLGVAPEKAIKLTVNubiquitination[3]
409VAPEKAIKLTVNDFVubiquitination[3]
485LGFFGIYKGAKACFLacetylation[1, 2, 5, 7, 8, 9]
485LGFFGIYKGAKACFLsuccinylation[9]
485LGFFGIYKGAKACFLubiquitination[3]
546VTPADVIKTRLQVAAacetylation[2]
577ILREEGPKALWKGVAacetylation[7]
581EGPKALWKGVAARVFacetylation[5, 7, 9]
581EGPKALWKGVAARVFsuccinylation[9]
642PDHVGGYKLAVATFAacetylation[5]
663GLYLPLFKPSASTSKacetylation[2]
Reference
 [1] Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.
 Kim SC, Sprung R, Chen Y, Xu Y, Ball H, Pei J, Cheng T, Kho Y, Xiao H, Xiao L, Grishin NV, White M, Yang XJ, Zhao Y.
 Mol Cell. 2006 Aug;23(4):607-18. [PMID: 16916647]
 [2] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [3] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [4] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [5] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [6] Functional lysine modification by an intrinsically reactive primary glycolytic metabolite.
 Moellering RE, Cravatt BF.
 Science. 2013 Aug 2;341(6145):549-53. [PMID: 23908237]
 [7] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [8] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [9] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
 Catalyzes the calcium-dependent exchange of cytoplasmic glutamate with mitochondrial aspartate across the mitochondrial inner membrane. May have a function in the urea cycle. 
Sequence Annotation
 DOMAIN 51 86 EF-hand 1.
 DOMAIN 87 122 EF-hand 2.
 DOMAIN 123 157 EF-hand 3.
 DOMAIN 158 193 EF-hand 4.
 REPEAT 327 419 Solcar 1.
 REPEAT 427 511 Solcar 2.
 REPEAT 519 607 Solcar 3.
 MOD_RES 18 18 N6-acetyllysine.
 MOD_RES 485 485 N6-acetyllysine.  
Keyword
 Acetylation; Calcium; Complete proteome; Direct protein sequencing; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Reference proteome; Repeat; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 676 AA 
Protein Sequence
MAAAKVALTK RADPAELKAI FLKYASIEKN GEFFMSPHDF VTRYLNIFGE SQPNPKTVEL 60
LSGVVDQTKD GLISFQEFVA FESVLCAPDA LFMVAFQLFD KAGKGEVTFE DVKQIFGQTT 120
IHQHIPFNWD SEFVQLHFGK ERKRHLTYAE FTQFLLEIQL EHAKQAFVQR DNAKTGKVSA 180
IDFRDIMVTI RPHVLTPFVE ECLVAAAGGT RSHQVSFSYF NGFNSLLNNM ELIRKIYSTL 240
AGNRKDVEVT KEEFALAAQK FGQVTPMEVD ILFQLADLYE PRGRMTLADI ERIAPLEEGM 300
LPFNLAEAQR QQKASGDAAR PFLLQLAESA YRFGLGSIAG AVGATAVYPI DLVKTRMQNQ 360
RSTGSFVGEL MYKNSFDCFK KVLRYEGFFG LYRGLLPQLL GVAPEKAIKL TVNDFVRDKF 420
MHKDGSVPLL AEIFAGGCAG GSQVIFTNPL EIVKIRLQVA GEITTGPRVS ALSVVRDLGF 480
FGIYKGAKAC FLRDIPFSAI YFPCYAHVKA SFANEDGQVS PGSLLLAGAI AGMPAASLVT 540
PADVIKTRLQ VAARAGQTTY NGVTDCFRKI LREEGPKALW KGVAARVFRS SPQFGVTLLT 600
YELLQRWFYV DFGGVKPVGS EPVPKSRITL PAPNPDHVGG YKLAVATFAG IENKFGLYLP 660
LFKPSASTSK VTAGDS 676 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005743; C:mitochondrial inner membrane; IDA:MGI.
 GO:0005509; F:calcium ion binding; IEA:Compara.
 GO:0015183; F:L-aspartate transmembrane transporter activity; ISS:UniProtKB.
 GO:0005313; F:L-glutamate transmembrane transporter activity; IMP:MGI.
 GO:0006754; P:ATP biosynthetic process; IEA:Compara.
 GO:0043490; P:malate-aspartate shuttle; IMP:MGI.
 GO:0051592; P:response to calcium ion; ISS:UniProtKB. 
Interpro
 IPR011992; EF-hand-like_dom.
 IPR002048; EF_hand_dom.
 IPR002067; Mit_carrier.
 IPR018108; Mitochondrial_sb/sol_carrier.
 IPR023395; Mt_carrier_dom. 
Pfam
 PF13405; EF_hand_4
 PF00153; Mito_carr 
SMART
 SM00054; EFh 
PROSITE
 PS00018; EF_HAND_1
 PS50222; EF_HAND_2
 PS50920; SOLCAR 
PRINTS
 PR00926; MITOCARRIER.