CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-032129
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable tRNA pseudouridine synthase 2 
Protein Synonyms/Alias
 cDNA FLJ52131, highly similar to Homo sapiens TruB pseudouridine (psi) synthase homolog 2 (TRUB2), mRNA 
Gene Name
 TRUB2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
80TVRGLLGKATDDFREubiquitination[1]
240QVAAELEKSLSPGLDubiquitination[2]
249LSPGLDTKQLPSPGWubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 275 AA 
Protein Sequence
MEGSEEKELT LTATSVPSFI NHPLVCGPAF AHLKVGVGHR LDAQASGVLV LGVGHGCRLL 60
TDMYNAHLTK DYTVRGLLGK ATDDFREDGR LVEKTTYDHV TREKLDRILA VIQGSHQKAL 120
VMYSNLDLKT QEAYEMAVRG LIRPMNKSPM LITGIRCLYF APPEFLLEVQ CMHETQKELR 180
KLVHEIGLEL KTTAVCTQVR RTRDGFFTLD SALLRTQWDL TNIQDAIRAA TPQVAAELEK 240
SLSPGLDTKQ LPSPGWSWDS QGPSSTLGLE RGAGQ 275 
Gene Ontology
 GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
 GO:0006396; P:RNA processing; IEA:InterPro. 
Interpro
 IPR002501; PsdUridine_synth.
 IPR020103; PsdUridine_synth_cat_dom. 
Pfam
 PF01509; TruB_N 
SMART
  
PROSITE
  
PRINTS