CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005139
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Chromobox protein homolog 3 
Protein Synonyms/Alias
 Heterochromatin protein 1 homolog gamma; HP1 gamma; M32; Modifier 2 protein 
Gene Name
 Cbx3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
34PEEFVVEKVLDRRVVubiquitination[1]
113KKRDAADKPRGFARGacetylation[2]
143LMFLMKWKDSDEADLacetylation[3]
154EADLVLAKEANMKCPubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
 Component of heterochromatin. Recognizes and binds histone H3 tails methylated at 'Lys-9', leading to epigenetic repression. Probably involved in the repression of many genes located in euchromatin, such as E2F1, MYC and CDC25A. Involved in the formation of functional kinetochore through interaction with MIS12 complex proteins (By similarity). 
Sequence Annotation
 DOMAIN 30 88 Chromo 1.
 DOMAIN 121 179 Chromo 2; shadow subtype.
 MOD_RES 10 10 N6-acetyllysine (By similarity).
 MOD_RES 44 44 N6-acetyllysine (By similarity).
 MOD_RES 50 50 N6-acetyllysine (By similarity).
 MOD_RES 93 93 Phosphoserine.
 MOD_RES 95 95 Phosphoserine.
 MOD_RES 97 97 Phosphoserine (By similarity).
 MOD_RES 99 99 Phosphoserine (By similarity).
 MOD_RES 176 176 Phosphoserine.  
Keyword
 Acetylation; Chromatin regulator; Complete proteome; Direct protein sequencing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Repressor; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 183 AA 
Protein Sequence
MASNKTTLQK MGKKQNGKSK KVEEAEPEEF VVEKVLDRRV VNGKVEYFLK WKGFTDADNT 60
WEPEENLDCP ELIEDFLNSQ KAGKEKDGTK RKSLSDSESD DSKSKKKRDA ADKPRGFARG 120
LDPERIIGAT DSSGELMFLM KWKDSDEADL VLAKEANMKC PQIVIAFYEE RLTWHSCPED 180
EAQ 183 
Gene Ontology
 GO:0000779; C:condensed chromosome, centromeric region; IDA:UniProtKB.
 GO:0031618; C:nuclear centromeric heterochromatin; IDA:UniProtKB.
 GO:0005635; C:nuclear envelope; IDA:UniProtKB.
 GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR017984; Chromo_dom_subgr.
 IPR023780; Chromo_domain.
 IPR000953; Chromo_domain/shadow.
 IPR008251; Chromo_shadow_dom.
 IPR016197; Chromodomain-like.
 IPR023779; Chromodomain_CS. 
Pfam
 PF00385; Chromo
 PF01393; Chromo_shadow 
SMART
 SM00298; CHROMO
 SM00300; ChSh 
PROSITE
 PS00598; CHROMO_1
 PS50013; CHROMO_2 
PRINTS
 PR00504; CHROMODOMAIN.