CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009330
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ATP-binding cassette sub-family E member 1 
Protein Synonyms/Alias
 RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I 
Gene Name
 Abce1 
Gene Synonyms/Alias
 Rli 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
64GCGICIKKCPFGALSubiquitination[1]
93RYCANAFKLHRLPIPacetylation[2]
93RYCANAFKLHRLPIPubiquitination[1]
116VGTNGIGKSTALKILubiquitination[1]
121IGKSTALKILAGKQKubiquitination[1]
158ELQNYFTKILEDDLKubiquitination[1]
165KILEDDLKAIIKPQYubiquitination[1]
169DDLKAIIKPQYVDQIubiquitination[1]
178QYVDQIPKAAKGTVGubiquitination[1]
191VGSILDRKDETKTQAacetylation[3]
191VGSILDRKDETKTQAubiquitination[1]
250PSSYLDVKQRLKAAIubiquitination[1]
349VKKMCMYKYPGMKKKacetylation[2]
397RMLAGRLKPDEGGEVacetylation[4]
397RMLAGRLKPDEGGEVubiquitination[1]
419KPQKISPKSTGSVRQubiquitination[1]
431VRQLLHEKIRDAYTHacetylation[3]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [3] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [4] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123
Functional Description
 Antagonizes the binding of 2-5A (5'-phosphorylated 2',5'-linked oligoadenylates) by RNase L through direct interaction with RNase L and therefore inhibits its endoribonuclease activity. May play a central role in the regulation of mRNA turnover. Antagonizes the anti-viral effect of the interferon-regulated 2-5A/RNase L pathway (By similarity). 
Sequence Annotation
 DOMAIN 7 37 4Fe-4S ferredoxin-type 1.
 DOMAIN 46 75 4Fe-4S ferredoxin-type 2.
 DOMAIN 79 315 ABC transporter 1.
 DOMAIN 342 562 ABC transporter 2.
 NP_BIND 110 117 ATP 1 (Potential).
 NP_BIND 379 386 ATP 2 (Potential).  
Keyword
 ATP-binding; Chaperone; Complete proteome; Cytoplasm; Mitochondrion; Nucleotide-binding; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 599 AA 
Protein Sequence
MADKLTRIAI VNHDKCKPKK CRQECKKSCP VVRMGKLCIE VTPQSKIAWI SETLCIGCGI 60
CIKKCPFGAL SIVNLPSNLE KETTHRYCAN AFKLHRLPIP RPGEVLGLVG TNGIGKSTAL 120
KILAGKQKPN LGKYDDPPDW QEILTYFRGS ELQNYFTKIL EDDLKAIIKP QYVDQIPKAA 180
KGTVGSILDR KDETKTQAIV CQQLDLTHLK ERNVEDLSGG ELQRFACAVV CIQKADIFMF 240
DEPSSYLDVK QRLKAAITIR SLINPDRYII VVEHDLSVLD YLSDFICCLY GVPSAYGVVT 300
MPFSVREGIN IFLDGYVPTE NLRFRDASLV FKVAETANEE EVKKMCMYKY PGMKKKMGEF 360
ELAIVAGEFT DSEIMVMLGE NGTGKTTFIR MLAGRLKPDE GGEVPVLNVS YKPQKISPKS 420
TGSVRQLLHE KIRDAYTHPQ FVTDVMKPLQ IENIIDQEVQ TLSGGELQRV ALALCLGKPA 480
DVYLIDEPSA YLDSEQRLMA ARVVKRFILH AKKTAFVVEH DFIMATYLAD RVIVFDGVPS 540
KNTVANSPQT LLAGMNKFLS QLEITFRRDP NNYRPRINKL NSIKDVEQKK SGNYFFLDD 599 
Gene Ontology
 GO:0005739; C:mitochondrion; ISS:UniProtKB.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0016887; F:ATPase activity; IEA:InterPro.
 GO:0009055; F:electron carrier activity; IEA:InterPro.
 GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
 GO:0006200; P:ATP catabolic process; IEA:GOC. 
Interpro
 IPR001450; 4Fe4S-bd_dom.
 IPR017896; 4Fe4S_Fe-S-bd.
 IPR017900; 4Fe4S_Fe_S_CS.
 IPR003593; AAA+_ATPase.
 IPR013283; ABC_E.
 IPR003439; ABC_transporter-like.
 IPR017871; ABC_transporter_CS.
 IPR027417; P-loop_NTPase.
 IPR007209; RNaseL-inhib_metal-bd_dom. 
Pfam
 PF00005; ABC_tran
 PF00037; Fer4
 PF04068; RLI 
SMART
 SM00382; AAA 
PROSITE
 PS00198; 4FE4S_FER_1
 PS51379; 4FE4S_FER_2
 PS00211; ABC_TRANSPORTER_1
 PS50893; ABC_TRANSPORTER_2 
PRINTS
 PR01868; ABCEFAMILY.