CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000620
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 E3 ubiquitin-protein ligase RING1 
Protein Synonyms/Alias
 Polycomb complex protein RING1; RING finger protein 1; Transcription repressor Ring1A 
Gene Name
 Ring1 
Gene Synonyms/Alias
 Ring1A; Rnf1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
285YCQTRYVKTTGNATVubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Constitutes one of the E3 ubiquitin-protein ligases that mediate monoubiquitination of 'Lys-119' of histone H2A, thereby playing a central role in histone code and gene regulation. H2A 'Lys-119' ubiquitination gives a specific tag for epigenetic transcriptional repression and participates in X chromosome inactivation of female mammals. Essential component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones, rendering chromatin heritably changed in its expressibility. Compared to RNF2/RING2, it does not have the main E3 ubiquitin ligase activity on histone H2A, and it may rather act as a modulator of RNF2/RING2 activity (By similarity). 
Sequence Annotation
 ZN_FING 48 88 RING-type.
 REGION 30 234 Necessary for transcriptional repression.
 REGION 230 406 Necessary for interaction with CBX2.
 MOTIF 201 204 Nuclear localization signal (By
 MOD_RES 38 38 Phosphoserine (By similarity).
 MOD_RES 140 140 Phosphoserine (By similarity).
 MOD_RES 187 187 Phosphoserine (By similarity).
 MOD_RES 190 190 Phosphoserine (By similarity).
 MOD_RES 248 248 Phosphoserine (By similarity).
 MOD_RES 254 254 Phosphoserine (By similarity).  
Keyword
 Alternative splicing; Chromatin regulator; Complete proteome; Ligase; Metal-binding; Nucleus; Phosphoprotein; Reference proteome; Repressor; Transcription; Transcription regulation; Ubl conjugation pathway; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 406 AA 
Protein Sequence
MTTPANAQNA SKTWELSLYE LHRTPQEAIM DGTEIAVSPR SLHSELMCPI CLDMLKNTMT 60
TKECLHRFCS DCIVTALRSG NKECPTCRKK LVSKRSLRPD PNFDALISKI YPSREEYEAH 120
QDRVLIRLSR LHNQQALSSS IEEGLRMQAM HRAQRVRRPM PGSDQTATMS GGEGEPGEGE 180
GDGEDVSSDS APDSAPGPAP KRPRGAGAGA SSVGTGGGAA GGACGGAGSE DSGDRGGTLG 240
GGTLGPPSPP GAPSPPEPGG EIELVFRPHP LLVEKGEYCQ TRYVKTTGNA TVDHLSKYLA 300
LRIALERRQQ QETTEPGGPG GGASDTGGPD GGGGERGVAG GGEGPEEPAL PSLEGVSEKQ 360
YTIYIAPGGG AFTTLNGSLT LELVNEKFWK VSRPLELCYA PTKDPK 406 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0016604; C:nuclear body; IDA:MGI.
 GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
 GO:0031519; C:PcG protein complex; IDA:MGI.
 GO:0035102; C:PRC1 complex; IEA:Compara.
 GO:0001739; C:sex chromatin; IDA:MGI.
 GO:0000151; C:ubiquitin ligase complex; IDA:MGI.
 GO:0003682; F:chromatin binding; IDA:MGI.
 GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.
 GO:0048593; P:camera-type eye morphogenesis; IGI:MGI.
 GO:0035518; P:histone H2A monoubiquitination; IEA:Compara.
 GO:0016574; P:histone ubiquitination; IDA:MGI.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR018957; Znf_C3HC4_RING-type.
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD.
 IPR017907; Znf_RING_CS. 
Pfam
 PF00097; zf-C3HC4 
SMART
 SM00184; RING 
PROSITE
 PS00518; ZF_RING_1
 PS50089; ZF_RING_2 
PRINTS