CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006651
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Coproporphyrinogen-III oxidase, mitochondrial 
Protein Synonyms/Alias
 COX; Coprogen oxidase; Coproporphyrinogenase 
Gene Name
 CPOX 
Gene Synonyms/Alias
 CPO; CPX 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
184SVDRWERKEGGGGISubiquitination[1]
220NLSEEAAKQMRSRGKubiquitination[1, 2, 3]
232RGKVLKTKDGKLPFCubiquitination[1]
235VLKTKDGKLPFCAMGubiquitination[1]
347DDLDSPSKEEVFRFVubiquitination[1, 2, 3]
370PSYIPLVKKHCDDSFubiquitination[2, 3]
371SYIPLVKKHCDDSFTubiquitination[1]
404LLYDRGTKFGLFTPGubiquitination[2, 3]
438HSPSENSKEAEILEVubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III. 
Sequence Annotation
 REGION 193 202 Important for dimerization.
 REGION 260 262 Substrate binding.
 REGION 392 428 Important for dimerization.
 REGION 411 416 Substrate binding.
 ACT_SITE 258 258 Proton donor.
 BINDING 244 244 Substrate.
 MOD_RES 371 371 N6-acetyllysine (By similarity).  
Keyword
 3D-structure; Acetylation; Complete proteome; Disease mutation; Heme biosynthesis; Mitochondrion; Oxidoreductase; Polymorphism; Porphyrin biosynthesis; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 454 AA 
Protein Sequence
MALQLGRLSS GPCWLVARGG CGGPRAWSQC GGGGLRAWSQ RSAAGRVCRP PGPAGTEQSR 60
GLGHGSTSRG GPWVGTGLAA ALAGLVGLAT AAFGHVQRAE MLPKTSGTRA TSLGRPEEEE 120
DELAHRCSSF MAPPVTDLGE LRRRPGDMKT KMELLILETQ AQVCQALAQV DGGANFSVDR 180
WERKEGGGGI SCVLQDGCVF EKAGVSISVV HGNLSEEAAK QMRSRGKVLK TKDGKLPFCA 240
MGVSSVIHPK NPHAPTIHFN YRYFEVEEAD GNKQWWFGGG CDLTPTYLNQ EDAVHFHRTL 300
KEACDQHGPD LYPKFKKWCD DYFFIAHRGE RRGIGGIFFD DLDSPSKEEV FRFVQSCARA 360
VVPSYIPLVK KHCDDSFTPQ EKLWQQLRRG RYVEFNLLYD RGTKFGLFTP GSRIESILMS 420
LPLTARWEYM HSPSENSKEA EILEVLRHPR DWVR 454 
Gene Ontology
 GO:0005743; C:mitochondrial inner membrane; IEA:Compara.
 GO:0005758; C:mitochondrial intermembrane space; TAS:Reactome.
 GO:0004109; F:coproporphyrinogen oxidase activity; TAS:Reactome.
 GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.
 GO:0006783; P:heme biosynthetic process; TAS:Reactome.
 GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0046685; P:response to arsenic-containing substance; IEA:Compara.
 GO:0017085; P:response to insecticide; IEA:Compara.
 GO:0010039; P:response to iron ion; IEA:Compara.
 GO:0010288; P:response to lead ion; IEA:Compara.
 GO:0051597; P:response to methylmercury; IEA:Compara.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome. 
Interpro
 IPR001260; Coprogen_oxidase_aer.
 IPR018375; Coprogen_oxidase_CS. 
Pfam
 PF01218; Coprogen_oxidas 
SMART
  
PROSITE
 PS01021; COPROGEN_OXIDASE 
PRINTS
 PR00073; COPRGNOXDASE.