CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010978
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vacuolar protein sorting-associated protein 28 
Protein Synonyms/Alias
 ESCRT-I complex subunit VPS28 
Gene Name
 VPS28 
Gene Synonyms/Alias
 VPT28; YPL065W; LPE5W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
59HVEKAYLKDSIDDTQubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Required for normal endocytic and biosynthetic traffic to the yeast vacuole. 
Sequence Annotation
 DOMAIN 11 125 VPS28 N-terminal.
 DOMAIN 148 242 VPS28 C-terminal.
 REGION 148 242 Interaction with VSP36 and VPS20.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Endosome; Membrane; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 242 AA 
Protein Sequence
MQKHNIKLNQ NQDISQLFHD EVPLFDNSIT SKDKEVIETL SEIYSIVITL DHVEKAYLKD 60
SIDDTQYTNT VDKLLKQFKV YLNSQNKEEI NKHFQSIEAF CDTYNITASN AITRLERGIP 120
ITAEHAISTT TSAPSGDNKQ SSSSDKKFNA KYVAEATGNF ITVMDALKLN YNAKDQLHPL 180
LAELLISINR VTRDDFENRS KLIDWIVRIN KLSIGDTLTE TQIRELLFDL ELAYKSFYAL 240
LD 242 
Gene Ontology
 GO:0000813; C:ESCRT I complex; IDA:SGD.
 GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
 GO:0032403; F:protein complex binding; IDA:SGD.
 GO:0006612; P:protein targeting to membrane; IMP:SGD.
 GO:0006623; P:protein targeting to vacuole; IMP:SGD.
 GO:0043162; P:ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IC:SGD. 
Interpro
 IPR007143; VPS28.
 IPR017899; VPS28_C.
 IPR017898; VPS28_N. 
Pfam
 PF03997; VPS28 
SMART
  
PROSITE
 PS51310; VPS28_C
 PS51313; VPS28_N 
PRINTS