CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006652
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Coproporphyrinogen-III oxidase, mitochondrial 
Protein Synonyms/Alias
 COX; Coprogen oxidase; Coproporphyrinogenase 
Gene Name
 Cpox 
Gene Synonyms/Alias
 Cpo 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
303HGPDIYPKFKKWCDDacetylation[1]
344EEAFRFVKTCAEAVVacetylation[2]
360SYVPIVKKHCDDSYTacetylation[2, 3]
371DSYTPRDKLWQQLRRacetylation[1, 4, 5]
371DSYTPRDKLWQQLRRsuccinylation[4]
393LLYDRGTKFGLFTPGacetylation[1, 2, 4, 5, 6]
393LLYDRGTKFGLFTPGsuccinylation[4]
Reference
 [1] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [2] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [3] Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.
 Kim SC, Sprung R, Chen Y, Xu Y, Ball H, Pei J, Cheng T, Kho Y, Xiao H, Xiao L, Grishin NV, White M, Yang XJ, Zhao Y.
 Mol Cell. 2006 Aug;23(4):607-18. [PMID: 16916647]
 [4] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [5] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [6] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753
Functional Description
 Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III (By similarity). 
Sequence Annotation
 REGION 182 191 Important for dimerization (By
 REGION 249 251 Substrate binding (By similarity).
 REGION 381 417 Important for dimerization (By
 REGION 400 405 Substrate binding (By similarity).
 ACT_SITE 247 247 Proton donor (By similarity).
 BINDING 233 233 Substrate (By similarity).
 MOD_RES 99 99 Phosphoserine.
 MOD_RES 360 360 N6-acetyllysine.  
Keyword
 Acetylation; Complete proteome; Direct protein sequencing; Heme biosynthesis; Mitochondrion; Oxidoreductase; Phosphoprotein; Porphyrin biosynthesis; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 443 AA 
Protein Sequence
MALRLGRLGS DPWWRAVLGD YAQLRAASPR CASARVCQLP GTAGPQPRRG LGYGPWARGG 60
SGLGTRLAAT LAGLAGLAAA AFGHVQRAEM VPKSSGARSP SPGRREEDGD ELARRCSTFM 120
SSPVTELREL RRRPEDMKTK MELMIMETQA QVCRALAQVD GVADFTVDRW ERKEGGGGIT 180
CVLQDGRVFE KAGVSISVVH GNLSEEAANQ MRGRGKTLKT KDSKLPFTAM GVSSVIHPKN 240
PYAPTMHFNY RYFEVEEADG NTHWWFGGGC DLTPTYLNQE DAVHFHRTLK EACDQHGPDI 300
YPKFKKWCDD YFFIVHRGER RGIGGIFFDD LDSPSKEEAF RFVKTCAEAV VPSYVPIVKK 360
HCDDSYTPRD KLWQQLRRGR YVEFNLLYDR GTKFGLFTPG SRIESILMSL PLTARWEYMH 420
SPPENSKEAE ILEVLRHPKD WVH 443 
Gene Ontology
 GO:0005743; C:mitochondrial inner membrane; IEA:Compara.
 GO:0005758; C:mitochondrial intermembrane space; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0004109; F:coproporphyrinogen oxidase activity; IDA:MGI.
 GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.
 GO:0006783; P:heme biosynthetic process; IDA:MGI.
 GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0046685; P:response to arsenic-containing substance; IEA:Compara.
 GO:0017085; P:response to insecticide; IEA:Compara.
 GO:0010039; P:response to iron ion; IEA:Compara.
 GO:0010288; P:response to lead ion; IEA:Compara.
 GO:0051597; P:response to methylmercury; IEA:Compara. 
Interpro
 IPR001260; Coprogen_oxidase_aer.
 IPR018375; Coprogen_oxidase_CS. 
Pfam
 PF01218; Coprogen_oxidas 
SMART
  
PROSITE
 PS01021; COPROGEN_OXIDASE 
PRINTS
 PR00073; COPRGNOXDASE.