CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013114
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNA polymerase II elongation factor ELL2 
Protein Synonyms/Alias
  
Gene Name
 Ell2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
583KRLSPGSKEYQNVHEubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Elongation factor component of the super elongation complex (SEC), a complex required to increase the catalytic rate of RNA polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA (By similarity). Plays a role in immunoglobulin secretion in plasma cells: directs efficient alternative mRNA processing, influencing both proximal poly(A) site choice and exon skipping, as well as immunoglobulin heavy chain (IgH) alternative processing. Probably acts by regulating histone modifications accompanying transition from membrane-specific to secretory IgH mRNA expression. 
Sequence Annotation
 MOD_RES 501 501 Phosphoserine (By similarity).
 MOD_RES 579 579 Phosphoserine (By similarity).  
Keyword
 Complete proteome; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transcription regulation; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 639 AA 
Protein Sequence
MAAGGAAGLR EEQRYGLACG RLGQDNITVL HVKLTETAIR ALETYQSHKN LIPFRPSIQF 60
QGLQGLMKIP KNDPFNEVQN FNFYLSNVGR DNPQGSFDCI QQTLSSSGAS QLNCLGFIQD 120
KITVCATNDS YQMTRERMTQ AEEESRNRST KVIKPGGPYV GKRVQIRKAP QAISDTVPER 180
KRSTPMNPAN TIRKMHSGNS VSQRPYRDRV IHLLALKAYK KPELLARLQK DGVNQKDKNS 240
LGAILQQVAN LNPKDLSYTL KDYVFKELQR DWPGYSETDR QTLDLVLSRK LNPSQNASTS 300
RSESPLCSSK DAASSPQKRP LDSDFIDPLM NKKARISHLT NRVPPTLNGY LNPTSEKSCA 360
GLLPPPAAAA IPTLSPLPST HLPVSNPPQT VNSNSNSPST PEGLGTQDLP VDSFSQNGSI 420
FEDQQEKYTS RTCLETLPPS SALLKCPKPM EEEHPVSHKK SKKKSKKHKE KDQIKKLDIE 480
TMEEKEEDLQ REETAKLSNA SPNPNEGVKE GCTASMEPSS ALELPDYLIK YIAIVSYEQR 540
QNYKDDFNAE YDEYRALHAR METVARRFIK LDAQRKRLSP GSKEYQNVHE EVLQEYQKIK 600
QSSPNYHEEK YRCEYLHNKL AHIKRLIGEF DQQQAESWH 639 
Gene Ontology
 GO:0008023; C:transcription elongation factor complex; IEA:InterPro.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006368; P:transcription elongation from RNA polymerase II promoter; IEA:InterPro. 
Interpro
 IPR010844; Occludin_RNApol2_elong_fac_ELL.
 IPR019464; RNA_pol_II_elong_fac_ELL. 
Pfam
 PF10390; ELL
 PF07303; Occludin_ELL 
SMART
  
PROSITE
  
PRINTS