CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006200
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 NADH pyrophosphatase 
Protein Synonyms/Alias
  
Gene Name
 nudC 
Gene Synonyms/Alias
 yjaD; b3996; JW5548 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
7*MDRIIEKLDHGWWVacetylation[1]
20WVVSHEQKLWLPKGEacetylation[1]
25EQKLWLPKGELPYGEacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
  
Sequence Annotation
 DOMAIN 125 248 Nudix hydrolase.
 MOTIF 159 180 Nudix box.
 METAL 98 98 Zinc.
 METAL 101 101 Zinc.
 METAL 116 116 Zinc.
 METAL 119 119 Zinc.
 METAL 174 174 Divalent metal cation (By similarity).
 METAL 178 178 Divalent metal cation (By similarity).  
Keyword
 3D-structure; Complete proteome; Hydrolase; Magnesium; Manganese; Metal-binding; NAD; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 257 AA 
Protein Sequence
MDRIIEKLDH GWWVVSHEQK LWLPKGELPY GEAANFDLVG QRALQIGEWQ GEPVWLVQQQ 60
RRHDMGSVRQ VIDLDVGLFQ LAGRGVQLAE FYRSHKYCGY CGHEMYPSKT EWAMLCSHCR 120
ERYYPQIAPC IIVAIRRDDS ILLAQHTRHR NGVHTVLAGF VEVGETLEQA VAREVMEESG 180
IKVKNLRYVT SQPWPFPQSL MTAFMAEYDS GDIVIDPKEL LEANWYRYDD LPLLPPPGTV 240
ARRLIEDTVA MCRAEYE 257 
Gene Ontology
 GO:0000287; F:magnesium ion binding; IEA:HAMAP.
 GO:0030145; F:manganese ion binding; IDA:EcoCyc.
 GO:0000210; F:NAD+ diphosphatase activity; IEA:HAMAP.
 GO:0035529; F:NADH pyrophosphatase activity; IDA:EcoCyc.
 GO:0008270; F:zinc ion binding; IEA:HAMAP. 
Interpro
 IPR015375; NADH_PPase-like_N.
 IPR022925; NADH_pyroPase_NudC.
 IPR020084; NUDIX_hydrolase_CS.
 IPR000086; NUDIX_hydrolase_dom.
 IPR015797; NUDIX_hydrolase_dom-like.
 IPR015376; Znr_NADH_PPase. 
Pfam
 PF00293; NUDIX
 PF09296; NUDIX-like
 PF09297; zf-NADH-PPase 
SMART
  
PROSITE
 PS51462; NUDIX
 PS00893; NUDIX_BOX 
PRINTS