CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009461
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S18 
Protein Synonyms/Alias
  
Gene Name
 Rps18 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
94QKDVKDGKYSQVLANacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA (By similarity). 
Sequence Annotation
 MOD_RES 2 2 N-acetylserine.
 MOD_RES 94 94 N6-acetyllysine (By similarity).
 MOD_RES 106 106 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 152 AA 
Protein Sequence
MSLVIPEKFQ HILRVLNTNI DGRRKIAFAI TAIKGVGRRY AHVVLRKADI DLTKRAGELT 60
EDEVERVITI MQNPRQYKIP DWFLNRQKDV KDGKYSQVLA NGLDNKLRED LERLKKIRAH 120
RGLRHFWGLR VRGQHTKTTG RRGRTVGVSK KK 152 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD.
 GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
 GO:0003735; F:structural constituent of ribosome; IBA:RefGenome.
 GO:0006417; P:regulation of translation; NAS:RGD.
 GO:0042254; P:ribosome biogenesis; IBA:RefGenome.
 GO:0006412; P:translation; IBA:RefGenome. 
Interpro
 IPR027437; 30s_Rbsml_prot_S13_C.
 IPR001892; Ribosomal_S13.
 IPR010979; Ribosomal_S13-like_H2TH.
 IPR018269; Ribosomal_S13_CS. 
Pfam
 PF00416; Ribosomal_S13 
SMART
  
PROSITE
 PS00646; RIBOSOMAL_S13_1
 PS50159; RIBOSOMAL_S13_2 
PRINTS