CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-036228
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Gamma-aminobutyric acid receptor subunit beta-1 
Protein Synonyms/Alias
  
Gene Name
 GABRB1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
94DTYFLNDKKSFVHGVubiquitination[1, 2, 3]
95TYFLNDKKSFVHGVTubiquitination[2]
104FVHGVTVKNRMIRLHubiquitination[2]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 117 AA 
Protein Sequence
MSYVKETVDR LLKGYDIRLR PDFGGPPVDV GMRIDVASID MVSEVNMDYT LTMYFQQSWK 60
DKRLSYSGIP LNLTLDNRVA DQLWVPDTYF LNDKKSFVHG VTVKNRMIRL HPDGTVL 117 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0030425; C:dendrite; IEA:Compara.
 GO:0016021; C:integral to membrane; IEA:InterPro.
 GO:0005635; C:nuclear envelope; IEA:Compara.
 GO:0043235; C:receptor complex; IEA:Compara.
 GO:0005253; F:anion channel activity; IEA:Compara.
 GO:0005230; F:extracellular ligand-gated ion channel activity; IEA:InterPro.
 GO:0004890; F:GABA-A receptor activity; IEA:Compara.
 GO:0021954; P:central nervous system neuron development; IEA:Compara.
 GO:0042698; P:ovulation cycle; IEA:Compara.
 GO:0032570; P:response to progesterone stimulus; IEA:Compara.
 GO:0009636; P:response to toxic substance; IEA:Compara. 
Interpro
 IPR006202; Neur_chan_lig-bd.
 IPR006201; Neur_channel. 
Pfam
 PF02931; Neur_chan_LBD 
SMART
  
PROSITE
  
PRINTS