CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026308
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein LSM14 homolog B 
Protein Synonyms/Alias
  
Gene Name
 LSM14B 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
92SADNLNAKKLLPGKGubiquitination[1]
234GPNCYYDKSKSFFDNubiquitination[2]
236NCYYDKSKSFFDNISubiquitination[2, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 248 AA 
Protein Sequence
MAPYGPLAAS SLLSQQYAAS LGLEKLVSPP ASAAASSPSS SPSPQPVSEL DLSSEPQQLT 60
AKGAGFPSIP VGKSPMVEQA VQTGSADNLN AKKLLPGKGT TGTQLNGRQA QPSSKTASDV 120
VQPAAVQAQG QVNDENRRPQ RRRSGNRRTR NRSRGQNRPT NVKENTIKFE GDFDFESANA 180
QFNREELDKE FKKKLNFKDD KAEKGEEKDL AVVTQSAEAP AEEDLLGPNC YYDKSKSFFD 240
NISSELKT 248 
Gene Ontology
  
Interpro
 IPR025762; DFDF.
 IPR019050; FDF_dom.
 IPR025761; FFD_box. 
Pfam
 PF09532; FDF 
SMART
  
PROSITE
 PS51512; DFDF
 PS51513; FFD 
PRINTS