CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009989
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Caspase-3 
Protein Synonyms/Alias
 CASP-3; Apopain; Cysteine protease CPP32; CPP-32; LICE; Protein Yama; SREBP cleavage activity 1; SCA-1; Caspase-3 subunit p17; Caspase-3 subunit p12 
Gene Name
 Casp3 
Gene Synonyms/Alias
 Cpp32 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
11NKTSVDSKSINNFEVacetylation[1, 2, 3]
19SINNFEVKTIHGSKSacetylation[1]
19SINNFEVKTIHGSKSubiquitination[4]
25VKTIHGSKSVDSGIYacetylation[1, 3]
25VKTIHGSKSVDSGIYubiquitination[4]
57INNKNFHKSTGMSSRubiquitination[4]
82RETFMGLKYQVRNKNacetylation[1]
82RETFMGLKYQVRNKNubiquitination[4]
154YCRSLTGKPKLFIIQacetylation[1]
156RSLTGKPKLFIIQACacetylation[1]
229MLKLYAHKLEFMHILacetylation[1]
260DSTFHAKKQIPCIVSacetylation[1]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [4] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Involved in the activation cascade of caspases responsible for apoptosis execution. At the onset of apoptosis it proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Cleaves and activates sterol regulatory element binding proteins (SREBPs) between the basic helix-loop- helix leucine zipper domain and the membrane attachment domain. Cleaves and activates caspase-6, -7 and -9. Triggers cell adhesion in sympathetic neurons through RET cleavage (By similarity). Cleaves IL-1 beta between an Asp and an Ala, releasing the mature cytokine which is involved in a variety of inflammatory processes. 
Sequence Annotation
 ACT_SITE 121 121 By similarity.
 ACT_SITE 163 163 By similarity.
 MOD_RES 1 1 N-acetylmethionine (By similarity).
 MOD_RES 26 26 Phosphoserine.
 MOD_RES 163 163 S-nitrosocysteine; in inhibited form (By  
Keyword
 Acetylation; Apoptosis; Complete proteome; Cytoplasm; Hydrolase; Phosphoprotein; Protease; Reference proteome; S-nitrosylation; Thiol protease; Zymogen. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 277 AA 
Protein Sequence
MENNKTSVDS KSINNFEVKT IHGSKSVDSG IYLDSSYKMD YPEMGICIII NNKNFHKSTG 60
MSSRSGTDVD AANLRETFMG LKYQVRNKND LTREDILELM DSVSKEDHSK RSSFVCVILS 120
HGDEGVIYGT NGPVELKKLT SFFRGDYCRS LTGKPKLFII QACRGTELDC GIETDSGTDE 180
EMACQKIPVE ADFLYAYSTA PGYYSWRNSK DGSWFIQSLC SMLKLYAHKL EFMHILTRVN 240
RKVATEFESF SLDSTFHAKK QIPCIVSMLT KELYFYH 277 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0004190; F:aspartic-type endopeptidase activity; IDA:MGI.
 GO:0004861; F:cyclin-dependent protein serine/threonine kinase inhibitor activity; IMP:MGI.
 GO:0097200; F:cysteine-type endopeptidase activity involved in execution phase of apoptosis; IDA:MGI.
 GO:0006309; P:apoptotic DNA fragmentation; IMP:MGI.
 GO:0001782; P:B cell homeostasis; IMP:MGI.
 GO:0045165; P:cell fate commitment; IMP:MGI.
 GO:0071310; P:cellular response to organic substance; IDA:MGI.
 GO:0097192; P:extrinsic apoptotic signaling pathway in absence of ligand; IDA:MGI.
 GO:0008625; P:extrinsic apoptotic signaling pathway via death domain receptors; IMP:MGI.
 GO:0034349; P:glial cell apoptotic process; IMP:MGI.
 GO:0007507; P:heart development; IGI:MGI.
 GO:0006917; P:induction of apoptosis; IDA:MGI.
 GO:0008631; P:intrinsic apoptotic signaling pathway in response to oxidative stress; IDA:MGI.
 GO:0030216; P:keratinocyte differentiation; IMP:MGI.
 GO:0046007; P:negative regulation of activated T cell proliferation; IMP:MGI.
 GO:0043066; P:negative regulation of apoptotic process; IEA:Compara.
 GO:0030889; P:negative regulation of B cell proliferation; IMP:MGI.
 GO:0045736; P:negative regulation of cyclin-dependent protein serine/threonine kinase activity; IMP:MGI.
 GO:0051402; P:neuron apoptotic process; IDA:MGI.
 GO:0030264; P:nuclear fragmentation involved in apoptotic nuclear change; IEA:Compara.
 GO:0043525; P:positive regulation of neuron apoptotic process; IDA:MGI.
 GO:0016485; P:protein processing; IDA:MGI.
 GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
 GO:0001836; P:release of cytochrome c from mitochondria; IGI:MGI.
 GO:0006974; P:response to DNA damage stimulus; IDA:MGI.
 GO:0009411; P:response to UV; IDA:MGI.
 GO:0009611; P:response to wounding; IDA:MGI.
 GO:0007605; P:sensory perception of sound; IMP:MGI.
 GO:0043029; P:T cell homeostasis; IMP:MGI. 
Interpro
 IPR015470; Caspase_3.
 IPR011600; Pept_C14_cat.
 IPR001309; Pept_C14_ICE_p20.
 IPR016129; Pept_C14_ICE_p20_AS.
 IPR002138; Pept_C14_p10.
 IPR002398; Pept_C14_p45.
 IPR015917; Pept_C14_p45_core. 
Pfam
 PF00656; Peptidase_C14 
SMART
 SM00115; CASc 
PROSITE
 PS01122; CASPASE_CYS
 PS01121; CASPASE_HIS
 PS50207; CASPASE_P10
 PS50208; CASPASE_P20 
PRINTS
 PR00376; IL1BCENZYME.