CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009515
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein Synonyms/Alias
  
Gene Name
 ispH 
Gene Synonyms/Alias
 lytB; yaaE; b0029; JW0027 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
249AFLIDDAKDIQEEWVacetylation[1]
257DIQEEWVKEVKCVGVacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Is also involved in penicillin tolerance and control of the stringent response. Seems to directly or indirectly interact with RelA to maintain it in an inactive form during normal growth. 
Sequence Annotation
 REGION 225 227 Substrate binding.
 METAL 12 12 Iron-sulfur (3Fe-4S).
 METAL 96 96 Iron-sulfur (3Fe-4S).
 METAL 197 197 Iron-sulfur (3Fe-4S).
 BINDING 41 41 Substrate.
 BINDING 74 74 Substrate.
 BINDING 124 124 Substrate.
 BINDING 167 167 Substrate.
 BINDING 269 269 Substrate.  
Keyword
 3D-structure; 3Fe-4S; Complete proteome; Iron; Iron-sulfur; Isoprene biosynthesis; Metal-binding; NADP; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 316 AA 
Protein Sequence
MQILLANPRG FCAGVDRAIS IVENALAIYG APIYVRHEVV HNRYVVDSLR ERGAIFIEQI 60
SEVPDGAILI FSAHGVSQAV RNEAKSRDLT VFDATCPLVT KVHMEVARAS RRGEESILIG 120
HAGHPEVEGT MGQYSNPEGG MYLVESPDDV WKLTVKNEEK LSFMTQTTLS VDDTSDVIDA 180
LRKRFPKIVG PRKDDICYAT TNRQEAVRAL AEQAEVVLVV GSKNSSNSNR LAELAQRMGK 240
RAFLIDDAKD IQEEWVKEVK CVGVTAGASA PDILVQNVVA RLQQLGGGEA IPLEGREENI 300
VFEVPKELRV DIREVD 316 
Gene Ontology
 GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:HAMAP.
 GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:HAMAP.
 GO:0042380; F:hydroxymethylbutenyl pyrophosphate reductase activity; IDA:EcoCyc.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0050992; P:dimethylallyl diphosphate biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:HAMAP.
 GO:0046677; P:response to antibiotic; IDA:EcoCyc.
 GO:0016114; P:terpenoid biosynthetic process; IEA:HAMAP.
 GO:0006744; P:ubiquinone biosynthetic process; IDA:EcoCyc. 
Interpro
 IPR003451; LytB. 
Pfam
 PF02401; LYTB 
SMART
  
PROSITE
  
PRINTS