CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024267
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable cold shock protein A 
Protein Synonyms/Alias
  
Gene Name
 cspA 
Gene Synonyms/Alias
 MSMEG_6159; MSMEI_6001 
Created Date
 July 27, 2013 
Organism
 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) 
NCBI Taxa ID
 246196 
Lysine Modification
Position
Peptide
Type
References
47RTLEENQKVEFEVGQpupylation[1]
Reference
 [1] Expansion of the mycobacterial "PUPylome".
 Watrous J, Burns K, Liu WT, Patel A, Hook V, Bafna V, Barry CE 3rd, Bark S, Dorrestein PC.
 Mol Biosyst. 2010 Feb;6(2):376-85. [PMID: 20094657
Functional Description
  
Sequence Annotation
 DOMAIN 1 66 CSD.
 CROSSLNK 47 47 Isoglutamyl lysine isopeptide (Lys-Gln)  
Keyword
 Activator; Complete proteome; Cytoplasm; DNA-binding; Isopeptide bond; Reference proteome; Transcription; Transcription regulation; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 67 AA 
Protein Sequence
MPQGTVKWFN AEKGFGFIAP EDGSADVFVH YTEIQGSGFR TLEENQKVEF EVGQSPKGPQ 60
ATGVRTI 67 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR019844; Cold-shock_CS.
 IPR012156; Cold_shock_CspA.
 IPR011129; Cold_shock_prot.
 IPR002059; CSP_DNA-bd.
 IPR012340; NA-bd_OB-fold. 
Pfam
 PF00313; CSD 
SMART
 SM00357; CSP 
PROSITE
 PS00352; COLD_SHOCK 
PRINTS
 PR00050; COLDSHOCK.