CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003417
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 LOG family protein YgdH 
Protein Synonyms/Alias
  
Gene Name
 ygdH 
Gene Synonyms/Alias
 b2795; JW2766 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
73LRRERGVKLELINPPacetylation[1]
290PLILTGPKESADYFRacetylation[1]
415IEEFGPYKINGDKEIacetylation[1]
420PYKINGDKEIMRRMDacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 454 AA 
Protein Sequence
MITHISPLGS MDMLSQLEVD MLKRTASSDL YQLFRNCSLA VLNSGSLTDN SKELLSRFEN 60
FDINVLRRER GVKLELINPP EEAFVDGRII RALQANLFAV LRDILFVYGQ IHNTVRFPNL 120
NLDNSVHITN LVFSILRNAR ALHVGEAPNM VVCWGGHSIN ENEYLYARRV GNQLGLRELN 180
ICTGCGPGAM EAPMKGAAVG HAQQRYKDSR FIGMTEPSII AAEPPNPLVN ELIIMPDIEK 240
RLEAFVRIAH GIIIFPGGVG TAEELLYLLG ILMNPANKDQ VLPLILTGPK ESADYFRVLD 300
EFVVHTLGEN ARRHYRIIID DAAEVARQMK KSMPLVKENR RDTGDAYSFN WSMRIAPDLQ 360
MPFEPSHENM ANLKLYPDQP VEVLAADLRR AFSGIVAGNV KEVGIRAIEE FGPYKINGDK 420
EIMRRMDDLL QGFVAQHRMK LPGSAYIPCY EICT 454 
Gene Ontology
  
Interpro
 IPR021826; DUF3412.
 IPR005269; LOG. 
Pfam
 PF11892; DUF3412
 PF03641; Lysine_decarbox 
SMART
  
PROSITE
  
PRINTS