CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017184
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 GDP-mannose 4,6 dehydratase 
Protein Synonyms/Alias
 GDP-D-mannose dehydratase; GMD 
Gene Name
 Gmds 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
140LRLLDAIKTCGLINSacetylation[1]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441
Functional Description
 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (By similarity). 
Sequence Annotation
 NP_BIND 30 35 NADP (By similarity).
 NP_BIND 86 87 NADP (By similarity).
 NP_BIND 108 112 NADP (By similarity).
 ACT_SITE 155 155 By similarity.
 ACT_SITE 157 157 Nucleophile (By similarity).
 ACT_SITE 179 179 Nucleophile (By similarity).
 BINDING 123 123 NADP (By similarity).
 BINDING 183 183 NADP (By similarity).
 BINDING 209 209 NADP (By similarity).
 BINDING 214 214 NADP (By similarity).
 MOD_RES 2 2 N-acetylalanine (By similarity).  
Keyword
 Acetylation; Complete proteome; Lyase; NADP; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 372 AA 
Protein Sequence
MAQAPAKCPS YPGSGDGEMG KLRKVALITG ITGQDGSYLA EFLLEKGYEV HGIVRRSSSF 60
NTGRIEHLYK NPQAHIEGNM KLHYGDLTDS TCLVKIINEV KPTEIYNLGA QSHVKISFDL 120
AEYTADVDGV GTLRLLDAIK TCGLINSVKF YQASTSELYG KVQEIPQKET TPFYPRSPYG 180
AAKLYAYWIV VNFREAYNLF AVNGILFNHE SPRRGANFVT RKISRSVAKI YLGQLECFSL 240
GNLDAKRDWG HAKDYVEAMW LMLQNDEPED FVIATGEVHS VREFVEKSFM HIGKTIVWEG 300
KNENEVGRCK ETGKVHVTVD LKYYRPTEVD FLQGDCSKAQ QKLNWKPRVA FDELVREMVQ 360
ADVELMRTNP NA 372 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0008446; F:GDP-mannose 4,6-dehydratase activity; ISS:UniProtKB.
 GO:0070401; F:NADP+ binding; ISS:UniProtKB.
 GO:0042351; P:'de novo' GDP-L-fucose biosynthetic process; ISS:UniProtKB.
 GO:0019673; P:GDP-mannose metabolic process; ISS:UniProtKB.
 GO:0007219; P:Notch signaling pathway; ISS:UniProtKB. 
Interpro
 IPR001509; Epimerase_deHydtase.
 IPR006368; GDP_Man_deHydtase.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF01370; Epimerase 
SMART
  
PROSITE
  
PRINTS