CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041281
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Sjoegren syndrome/scleroderma autoantigen 1 
Protein Synonyms/Alias
 Sjogren's syndrome/scleroderma autoantigen 1, isoform CRA_b 
Gene Name
 SSSCA1 
Gene Synonyms/Alias
 hCG_23279 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
30LLQDKQRKIYCVACQubiquitination[1, 2]
45ELDSDVDKDNPALNAubiquitination[2, 3, 4]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [4] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 162 AA 
Protein Sequence
MGDYLLRGYR MLGETCADCG TILLQDKQRK IYCVACQELD SDVDKDNPAL NAQAALSQAR 60
EHQLASASEL PLGSRPAPQP PVPRPEHCEG AAAGLKAAQG PPAPAVPPNT DVMACTQTAL 120
LQKLTWASAE LGSSTSLETS IQLCGLIRAC AEALRSLQQL QH 162 
Gene Ontology
  
Interpro
 IPR009563; Unchr_Sjogrens_synd/UPF0148. 
Pfam
 PF06677; Auto_anti-p27 
SMART
  
PROSITE
  
PRINTS