CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031162
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Catenin delta-2 
Protein Synonyms/Alias
 Uncharacterized protein; cDNA FLJ56233, highly similar to Catenin delta-2 
Gene Name
 CTNND2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
203PSIDSIQKDPREFGWubiquitination[1, 2, 3, 4, 5]
594RNKELIGKYAMRDLVubiquitination[1]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931]
 [4] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [5] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 888 AA 
Protein Sequence
MSSMSSAEEQ FQWQSQDGQK DIEDELTTGL ELVDSCIRSL QESGILDPQD YSTGETGSRA 60
SYSSQHGHLG PELRALQSPE HHIDPIYEDR VYQKPPMRSL SQSQGDPLPP AHTGTYRTST 120
APSSPGVDSV PLQRTGSQHG PQNAAAATFQ RASYAAGPAS NYADPYRQLQ YCPSVESPYS 180
KSGPALPPEG TLARSPSIDS IQKDPREFGW RDPELPEVIQ MLQHQFPSVQ SNAAAYLQHL 240
CFGDNKIKAE IRRQGGIQLL VDLLDHRMTE VHRSACGALR NLVYGKANDD NKIALKNCGG 300
IPALVRLLRK TTDLEIRELV TGVLWNLSSC DALKMPIIQD ALAVLTNAVI IPHSGWENSP 360
LQDDRKIQLH SSQVLRNATG CLRNVSSAGE EARRRMRECD GLTDALLYVI QSALGSSEID 420
SKTVENCVCI LRNLSYRLAA ETSQGQHMGT DELDGLLCGE ANGKDAESSG CWGKKKKKKK 480
SQDQWDGVGP LPDCAEPPKG IQMLWHPSIV KPYLTLLSEC SNPDTLEGAA GALQNLAAGS 540
WKWSVYIRAA VRKEKGLPIL VELLRIDNDR VVCAVATALR NMALDVRNKE LIGKYAMRDL 600
VHRLPGGNNS NNTASKAMSD DTVTAVCCTL HEVITKNMEN AKALRDAGGI EKLVGISKSK 660
GDKHSPKVVK AASQVLNSMW QYRDLRSLYK KDGWSQYHFV ASSSTIERDR QRPYSSSRTP 720
SISPVRVSPN NRSASAPASP REMISLKERK TDYECTGSNA TYHGAKGEHT SRKDAMTAQN 780
TGISTLYRNS YGAPAEDIKH NQVSAQPVPQ EPSRKDYETY QPFQNSTRNY DESFFEDQVH 840
HRPPASEYTM HLGLKSTGNY VDFYSAARPY SELNYETSHY PASPDSWV 888 
Gene Ontology
  
Interpro
 IPR011989; ARM-like.
 IPR016024; ARM-type_fold.
 IPR000225; Armadillo. 
Pfam
 PF00514; Arm 
SMART
 SM00185; ARM 
PROSITE
 PS50176; ARM_REPEAT 
PRINTS