CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044902
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Zinc finger CCHC domain-containing protein 2 
Protein Synonyms/Alias
  
Gene Name
 ZCCHC2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
87YLRDSEAKANGLSDPubiquitination[1]
139PQVDSVLKSLRAARGubiquitination[1, 2, 3]
242EVEVEPCKFAGPRAQubiquitination[1, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 378 AA 
Protein Sequence
XGLGPPVAGG AAAGAGMPGG GGGPSAALRE QERVYEWFGL VLGSAQRLEF MCGLLDLCNP 60
LELRFLGSCL EDLARKDYHY LRDSEAKANG LSDPGPLADF REPAVRSRLI VYLALLGSEN 120
REAAGRLHRL LPQVDSVLKS LRAARGEGSR GGAEDERGED GDGEQDAEKD GSGPEGGIVE 180
PRVGGGLGSR AQEELLLLFT MASLHPAFSF HQRVTLREHL ERLRAALRGG PEDAEVEVEP 240
CKFAGPRAQV RRTEPPWTRG AIAAPAASPA SLSDAPCPSP SPAQVARNPH PAAPSARGLS 300
FVSLGRSVPL PHPTPHPGRH SHPPSQNALE VPSVPRCCHG RRGAPRPGPL SEEKCRDVFG 360
SEHLSARCGS RRALEEPV 378 
Gene Ontology
  
Interpro
  
Pfam
  
SMART
  
PROSITE
  
PRINTS