CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002247
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Delta-aminolevulinic acid dehydratase 
Protein Synonyms/Alias
 ALADH; Porphobilinogen synthase 
Gene Name
 HEM2 
Gene Synonyms/Alias
 YGL040C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
170AVAVNYAKAGAHCVAubiquitination[1]
263GADGIIVKPSTFYLDubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen. 
Sequence Annotation
 ACT_SITE 210 210 Schiff-base intermediate with substrate.
 ACT_SITE 263 263 Schiff-base intermediate with substrate.
 METAL 133 133 Zinc; catalytic.
 METAL 135 135 Zinc; catalytic.
 METAL 143 143 Zinc; catalytic.
 BINDING 220 220 Substrate 1.
 BINDING 232 232 Substrate 1.
 BINDING 290 290 Substrate 2.
 BINDING 329 329 Substrate 2.
 MOD_RES 254 254 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Heme biosynthesis; Lyase; Metal-binding; Phosphoprotein; Porphyrin biosynthesis; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 342 AA 
Protein Sequence
MHTAEFLETE PTEISSVLAG GYNHPLLRQW QSERQLTKNM LIFPLFISDN PDDFTEIDSL 60
PNINRIGVNR LKDYLKPLVA KGLRSVILFG VPLIPGTKDP VGTAADDPAG PVIQGIKFIR 120
EYFPELYIIC DVCLCEYTSH GHCGVLYDDG TINRERSVSR LAAVAVNYAK AGAHCVAPSD 180
MIDGRIRDIK RGLINANLAH KTFVLSYAAK FSGNLYGPFR DAACSAPSNG DRKCYQLPPA 240
GRGLARRALE RDMSEGADGI IVKPSTFYLD IMRDASEICK DLPICAYHVS GEYAMLHAAA 300
EKGVVDLKTI AFESHQGFLR AGARLIITYL APEFLDWLDE EN 342 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0032791; F:lead ion binding; ISS:UniProtKB.
 GO:0004655; F:porphobilinogen synthase activity; ISS:UniProtKB.
 GO:0008270; F:zinc ion binding; ISS:UniProtKB.
 GO:0006783; P:heme biosynthetic process; ISS:UniProtKB.
 GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR001731; Porphobilinogen_synth. 
Pfam
 PF00490; ALAD 
SMART
 SM01004; ALAD 
PROSITE
 PS00169; D_ALA_DEHYDRATASE 
PRINTS
 PR00144; DALDHYDRTASE.