CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004338
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 15-hydroxyprostaglandin dehydrogenase [NAD(+)] 
Protein Synonyms/Alias
 15-PGDH; Prostaglandin dehydrogenase 1 
Gene Name
 HPGD 
Gene Synonyms/Alias
 PGDH1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
28FAEALLLKGAKVALVubiquitination[1]
31ALLLKGAKVALVDWNubiquitination[1]
57DEQFEPQKTLFIQCDubiquitination[1]
77QLRDTFRKVVDHFGRubiquitination[1]
98NAGVNNEKNWEKTLQubiquitination[1]
249IMKITTSKGIHFQDYubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Prostaglandin inactivation. Contributes to the regulation of events that are under the control of prostaglandin levels. Catalyzes the NAD-dependent dehydrogenation of lipoxin A4 to form 15-oxo-lipoxin A4. Inhibits in vivo proliferation of colon cancer cells. 
Sequence Annotation
 NP_BIND 12 20 NAD.
 NP_BIND 36 37 NAD.
 NP_BIND 63 65 NAD.
 NP_BIND 151 155 NAD.
 NP_BIND 186 188 NAD.
 ACT_SITE 151 151 Proton acceptor.
 BINDING 91 91 NAD; via carbonyl oxygen.
 BINDING 138 138 Substrate (Probable).
 BINDING 148 148 Substrate (Probable).  
Keyword
 3D-structure; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Disease mutation; Fatty acid metabolism; Lipid metabolism; NAD; Oxidoreductase; Polymorphism; Prostaglandin metabolism; Reference proteome; Tumor suppressor. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 266 AA 
Protein Sequence
MHVNGKVALV TGAAQGIGRA FAEALLLKGA KVALVDWNLE AGVQCKAALD EQFEPQKTLF 60
IQCDVADQQQ LRDTFRKVVD HFGRLDILVN NAGVNNEKNW EKTLQINLVS VISGTYLGLD 120
YMSKQNGGEG GIIINMSSLA GLMPVAQQPV YCASKHGIVG FTRSAALAAN LMNSGVRLNA 180
ICPGFVNTAI LESIEKEENM GQYIEYKDHI KDMIKYYGIL DPPLIANGLI TLIEDDALNG 240
AIMKITTSKG IHFQDYDTTP FQAKTQ 266 
Gene Ontology
 GO:0005829; C:cytosol; NAS:UniProtKB.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0016404; F:15-hydroxyprostaglandin dehydrogenase (NAD+) activity; IDA:UniProtKB.
 GO:0070403; F:NAD+ binding; IDA:UniProtKB.
 GO:0004957; F:prostaglandin E receptor activity; IDA:UniProtKB.
 GO:0042803; F:protein homodimerization activity; TAS:UniProtKB.
 GO:0019371; P:cyclooxygenase pathway; TAS:Reactome.
 GO:0097070; P:ductus arteriosus closure; ISS:UniProtKB.
 GO:0007565; P:female pregnancy; IDA:UniProtKB.
 GO:2001300; P:lipoxin metabolic process; TAS:Reactome.
 GO:0019372; P:lipoxygenase pathway; TAS:UniProtKB.
 GO:0045786; P:negative regulation of cell cycle; IDA:UniProtKB.
 GO:0030728; P:ovulation; ISS:UniProtKB.
 GO:0007567; P:parturition; IDA:UniProtKB.
 GO:0070493; P:thrombin receptor signaling pathway; ISS:UniProtKB.
 GO:0007179; P:transforming growth factor beta receptor signaling pathway; IDA:UniProtKB. 
Interpro
 IPR002198; DH_sc/Rdtase_SDR.
 IPR002347; Glc/ribitol_DH.
 IPR016040; NAD(P)-bd_dom.
 IPR020904; Sc_DH/Rdtase_CS. 
Pfam
 PF00106; adh_short 
SMART
  
PROSITE
 PS00061; ADH_SHORT 
PRINTS
 PR00081; GDHRDH.
 PR00080; SDRFAMILY.