CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022067
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Epimerase family protein SDR39U1 
Protein Synonyms/Alias
 Short-chain dehydrogenase/reductase family 39U member 1 
Gene Name
 SDR39U1 
Gene Synonyms/Alias
 C14orf124; HCDI 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
102RWNETFQKEVIGSRLubiquitination[1, 2, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Putative NADP-dependent oxidoreductase. 
Sequence Annotation
 NP_BIND 57 58 NADP.
 NP_BIND 84 88 NADP.
 BINDING 108 108 NADP.  
Keyword
 3D-structure; Alternative splicing; Complete proteome; NADP; Oxidoreductase; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 319 AA 
Protein Sequence
MGWRRKRVPQ RGRKAPPPQL HGNINNLYFP IRWRDRLHWD SPNPAAECQR HEVTLVSRKP 60
GPGRITWDEL AASGLPSCDA AVNLAGENIL NPLRRWNETF QKEVIGSRLE TTQLLAKAIT 120
KAPQPPKAWV LVTGVAYYQP SLTAEYDEDS PGGDFDFFSN LVTKWEAAAR LPGDSTRQVV 180
VRSGVVLGRG GGAMGHMLLP FRLGLGGPIG SGHQFFPWIH IGDLAGILTH ALEANHVHGV 240
LNGVAPSSAT NAEFAQTLGA ALGRRAFIPL PSAVVQAVFG RQRAIMLLEG QKVIPQRTLA 300
TGYQYSFPEL GAALKEIVA 319 
Gene Ontology
 GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW. 
Interpro
 IPR013549; DUF1731_C.
 IPR016040; NAD(P)-bd_dom.
 IPR010099; Sugar_nucleotide_Epase_put. 
Pfam
 PF08338; DUF1731 
SMART
  
PROSITE
  
PRINTS