CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-030066
UniProt Accession
B1WC28_RAT
;
B1WC28
Genbank Protein ID
AABR06101056
;
AABR06101057
;
BC161981
Genbank Nucleotide ID
AAI61981.1
Protein Name
Histone H2A
Protein Synonyms/Alias
Gene Name
H2afy2
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Rattus norvegicus (Rat)
NCBI Taxa ID
10116
Lysine Modification
Position
Peptide
Type
References
116
IHPELLA
K
KRGTKGK
ubiquitination
[1]
Reference
[1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
J Proteome Res. 2012 Sep 7;11(9):4722-32. [
PMID: 22871113
]
Functional Description
Sequence Annotation
Keyword
Chromosome; Complete proteome; DNA-binding; Nucleosome core; Nucleus; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
372 AA
Protein Sequence
MSGRSGKKKM SKLSRSARAG VIFPVGRLMR YLKKGTFKYR ISVGAPVYMA AVIEYLAAEI 60
LELAGNAARD NKKARIAPRH ILLAVANDEE LNQLLKGVTI ASGGVLPRIH PELLAKKRGT 120
KGKSETILSP PPEKRGRKAA SGKKGGKKSK ATKPRTSKKS KAKDSDKEGT SNSTSEDGPG 180
DGFTILSSKS LVLGQKLSLT QSDISHIGSM RVEGIVHPTT AEIDLKEEIG KALEKAGGKE 240
FLETVKELRK SQGPLEVAEA AVSQSSGLAA KFVIHCHIPQ WGSDKCEEQL EETIKNCLSA 300
AEDKKLKSVA FPPFPSGRNC FPKQTAAQVT LKAISAHFDD SSSSSLKNVY FLLFDSESIG 360
IYVQEMAKLD TK 372
Gene Ontology
GO:0001740
; C:Barr body; IEA:Compara.
GO:0000786
; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677
; F:DNA binding; IEA:UniProtKB-KW.
GO:0007549
; P:dosage compensation; IEA:Compara.
GO:0006334
; P:nucleosome assembly; IEA:InterPro.
Interpro
IPR002589
; A1pp.
IPR021171
; Core_histone_macro-H2A.
IPR009072
; Histone-fold.
IPR007125
; Histone_core_D.
IPR002119
; Histone_H2A.
Pfam
PF00125
; Histone
PF01661
; Macro
SMART
SM00414
; H2A
PROSITE
PS51154
; MACRO
PRINTS
PR00620
; HISTONEH2A.