CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002549
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cathepsin B 
Protein Synonyms/Alias
 APP secretase; APPS; Cathepsin B1; Cathepsin B light chain; Cathepsin B heavy chain 
Gene Name
 CTSB 
Gene Synonyms/Alias
 CPSB 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
220PGYSPTYKQDKHYGYubiquitination[1, 2]
223SPTYKQDKHYGYNSYubiquitination[1, 2]
237YSVSNSEKDIMAEIYubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis. 
Sequence Annotation
 ACT_SITE 108 108
 ACT_SITE 278 278
 ACT_SITE 298 298
 CARBOHYD 192 192 N-linked (GlcNAc...).
 DISULFID 93 122
 DISULFID 105 150
 DISULFID 141 207
 DISULFID 142 146
 DISULFID 179 211
 DISULFID 187 198  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Hydrolase; Lysosome; Polymorphism; Protease; Reference proteome; Secreted; Signal; Thiol protease; Zymogen. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 339 AA 
Protein Sequence
MWQLWASLCC LLVLANARSR PSFHPLSDEL VNYVNKRNTT WQAGHNFYNV DMSYLKRLCG 60
TFLGGPKPPQ RVMFTEDLKL PASFDAREQW PQCPTIKEIR DQGSCGSCWA FGAVEAISDR 120
ICIHTNAHVS VEVSAEDLLT CCGSMCGDGC NGGYPAEAWN FWTRKGLVSG GLYESHVGCR 180
PYSIPPCEHH VNGSRPPCTG EGDTPKCSKI CEPGYSPTYK QDKHYGYNSY SVSNSEKDIM 240
AEIYKNGPVE GAFSVYSDFL LYKSGVYQHV TGEMMGGHAI RILGWGVENG TPYWLVANSW 300
NTDWGDNGFF KILRGQDHCG IESEVVAGIP RTDQYWEKI 339 
Gene Ontology
 GO:0036021; C:endolysosome lumen; TAS:Reactome.
 GO:0005615; C:extracellular space; ISS:BHF-UCL.
 GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0005730; C:nucleolus; IDA:HPA.
 GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
 GO:0004197; F:cysteine-type endopeptidase activity; IDA:BHF-UCL.
 GO:0097067; P:cellular response to thyroid hormone stimulus; IEP:UniProtKB.
 GO:0030574; P:collagen catabolic process; TAS:Reactome.
 GO:0022617; P:extracellular matrix disassembly; TAS:Reactome.
 GO:0045087; P:innate immune response; TAS:Reactome.
 GO:0006508; P:proteolysis; IDA:UniProtKB.
 GO:0042981; P:regulation of apoptotic process; TAS:UniProtKB.
 GO:0050790; P:regulation of catalytic activity; IEA:InterPro.
 GO:0002224; P:toll-like receptor signaling pathway; TAS:Reactome. 
Interpro
 IPR025661; Pept_asp_AS.
 IPR000169; Pept_cys_AS.
 IPR025660; Pept_his_AS.
 IPR013128; Peptidase_C1A.
 IPR000668; Peptidase_C1A_C.
 IPR015643; Peptidase_C1A_cathepsin-B.
 IPR012599; Propeptide_C1A. 
Pfam
 PF00112; Peptidase_C1
 PF08127; Propeptide_C1 
SMART
 SM00645; Pept_C1 
PROSITE
 PS00640; THIOL_PROTEASE_ASN
 PS00139; THIOL_PROTEASE_CYS
 PS00639; THIOL_PROTEASE_HIS 
PRINTS
 PR00705; PAPAIN.