CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040604
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA replication ATP-dependent helicase/nuclease DNA2 
Protein Synonyms/Alias
  
Gene Name
 DNA2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
28LPAELFQKKVVASFPubiquitination[1, 2, 3, 4]
29PAELFQKKVVASFPRubiquitination[3, 5]
58AVNTVQNKEGNCEKRubiquitination[3, 5]
77ASQSLENKELCILRNubiquitination[3, 5]
178NNSFAPEKLQELAFQubiquitination[4]
194IQEIRHLKEMYRLNLubiquitination[3]
227WAGDFMHKNTSTDFPubiquitination[3, 5]
257TCNIEVVKPMDIEESubiquitination[3]
275PRFGLKGKIDVTVGVubiquitination[5]
293RGYKTKYKIMPLELKubiquitination[3, 5]
300KIMPLELKTGKESNSubiquitination[1, 3]
303PLELKTGKESNSIEHubiquitination[1]
351VPANHLDKRELLKLRubiquitination[1, 3, 5]
377SKSATRQKTQLASLPubiquitination[1, 3, 5]
391PQIIEEEKTCKYCSQubiquitination[3, 5]
394IEEEKTCKYCSQIGNubiquitination[2, 3, 5]
425VPIVMLPKIEEETQHubiquitination[3]
459SQSKDNKKNHQNIWLubiquitination[3]
474MPASEMEKSGSCIGNubiquitination[3]
489LIRMEHVKIVCDGQYubiquitination[2, 3, 5]
503YLHNFQCKHGAIPVTubiquitination[3, 4]
536ALSRGYVKEINMTTVubiquitination[3]
567FRLDQEEKNCDIDTPubiquitination[3, 5]
580TPLGNLSKLMENTFVubiquitination[3]
589MENTFVSKKLRDLIIubiquitination[3]
590ENTFVSKKLRDLIIDubiquitination[3]
624DTVACILKGLNKPQRubiquitination[3, 5, 6]
641MKKVLLSKDYTLIVGubiquitination[3]
710APYRQQLKIINDLLAubiquitination[3]
730VEVNTVDKYQGRDKSubiquitination[1, 5, 6]
757GTVGELLKDWRRLNVubiquitination[3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [5] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [6] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 801 AA 
Protein Sequence
MEQLNELELL MEKSFWEEAE LPAELFQKKV VASFPRTVLS TGMDNRYLVL AVNTVQNKEG 60
NCEKRLVITA SQSLENKELC ILRNDWCSVP VEPGDIIHLE GDCTSDTWII DKDFGYLILY 120
PDMLISGTSI ASSIRCMRRA VLSETFRSSD PATRQMLIGT VLHEVFQKAI NNSFAPEKLQ 180
ELAFQTIQEI RHLKEMYRLN LSQDEIKQEV EDYLPSFCKW AGDFMHKNTS TDFPQMQLSL 240
PSDNSKDNST CNIEVVKPMD IEESIWSPRF GLKGKIDVTV GVKIHRGYKT KYKIMPLELK 300
TGKESNSIEH RSQVVLYTLL SQERRADPEA GLLLYLKTGQ MYPVPANHLD KRELLKLRNQ 360
MAFSLFHRIS KSATRQKTQL ASLPQIIEEE KTCKYCSQIG NCALYSRAVE QQMDCSSVPI 420
VMLPKIEEET QHLKQTHLEY FSLWCLMLTL ESQSKDNKKN HQNIWLMPAS EMEKSGSCIG 480
NLIRMEHVKI VCDGQYLHNF QCKHGAIPVT NLMAGDRVIV SGEERSLFAL SRGYVKEINM 540
TTVTCLLDRN LSVLPESTLF RLDQEEKNCD IDTPLGNLSK LMENTFVSKK LRDLIIDFRE 600
PQFISYLSSV LPHDAKDTVA CILKGLNKPQ RQAMKKVLLS KDYTLIVGMP GTGKTTTICT 660
LVPAPEQVEK GGVSNVTEAK LIVFLTSIFV KAGCSPSDIG IIAPYRQQLK IINDLLARSI 720
GMVEVNTVDK YQGRDKSIVL VSFVRSNKDG TVGELLKDWR RLNVAITRAK HKLILLGCVP 780
SLNCYPPLEK LLNHLNSEKL I 801 
Gene Ontology
 GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
 GO:0043142; F:single-stranded DNA-dependent ATPase activity; IEA:InterPro.
 GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro. 
Interpro
 IPR026851; Dna2.
 IPR014808; DNA_replication_fac_Dna2_N.
 IPR027417; P-loop_NTPase. 
Pfam
 PF08696; Dna2 
SMART
  
PROSITE
  
PRINTS