CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019992
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ubiquilin-4 
Protein Synonyms/Alias
 Ataxin-1 interacting ubiquitin-like protein; A1Up; Ataxin-1 ubiquitin-like-interacting protein A1U; Connexin43-interacting protein of 75 kDa; CIP75 
Gene Name
 Ubqln4 
Gene Synonyms/Alias
 Cip75; Ubin 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
46EEISRRFKAQQDQLVubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Plays a role in the regulation of proteasomal protein degradation. Depending on the case, may promote or inhibit proteasomal protein degradation. 
Sequence Annotation
 DOMAIN 13 87 Ubiquitin-like.
 DOMAIN 548 593 UBA.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Endoplasmic reticulum; Nucleus; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 596 AA 
Protein Sequence
MAEPSGAETR PQIRVTVKTP KDKEEIVICD QASVKEFKEE ISRRFKAQQD QLVLIFAGKI 60
LKDGDTLSQH GIKDGLTVHL VIKTPQKAQD PVTAAASPPS TPDSASAPST TPASPAAAPV 120
QPCSSGNTTS DAGSGGGPSP VAAEGPSSAT ASILSGFGGI LGLGSLGLGS ANFMELQQQM 180
QRQLMSNPEM LSQIMENPLV QDMMSNPDLM RHMIMANPQM QQLMERNPEI SHMLNNPELM 240
RQTMELARNP AMMQEMMRNQ DRALSNLESV PGGYNALRRM YTDIQEPMFT AAREQFGNNP 300
FSSLAGNSDN SSSQPLRTEN REPLPNPWSP SPPTSQAPGS GGEGTGGSGT SQVHPTVSNP 360
FGINAASLGS GMFNSPEMQA LLQQISENPQ LMQNVISAPY MRTMMQTLAQ NPDFAAQMMV 420
NVPLFAGNPQ LQEQLRLQLP VFLQQMQNPE SLSILTNPRA MQALLQIQQG LQTLQTEAPG 480
LVPSLGSFGT PRTSVPLAGS NSGSSAEAPT SSPGVPATSP PSAGSNAQQQ LMQQMIQLLS 540
GSGNSQVPMP EVRFQQQLEQ LNSMGFINRE ANLQALIATG GDINAAIERL LGSQLS 596 
Gene Ontology
 GO:0005829; C:cytosol; IDA:MGI.
 GO:0031597; C:cytosolic proteasome complex; IEA:Compara.
 GO:0005789; C:endoplasmic reticulum membrane; IDA:MGI.
 GO:0031595; C:nuclear proteasome complex; IEA:Compara.
 GO:0005634; C:nucleus; ISS:UniProtKB.
 GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
 GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.
 GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB. 
Interpro
 IPR006636; STI1_HS-bd.
 IPR009060; UBA-like.
 IPR000449; UBA/transl_elong_EF1B_N.
 IPR015940; UBA/transl_elong_EF1B_N_euk.
 IPR015496; Ubiquilin.
 IPR000626; Ubiquitin.
 IPR019955; Ubiquitin_supergroup. 
Pfam
 PF00627; UBA
 PF00240; ubiquitin 
SMART
 SM00727; STI1
 SM00165; UBA
 SM00213; UBQ 
PROSITE
 PS50030; UBA
 PS00299; UBIQUITIN_1
 PS50053; UBIQUITIN_2 
PRINTS